Sequence details bmy_04187 (Coding sequence)

Part of scaffold_135 (Scaffold)

For more information consult the page for scaffold_135 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ITGB1 ENSBTAG00000015910 (Cow)

Gene Details

Integrin beta-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021156, Cow)

Protein Percentage 98.87%
cDNA percentage 94.86%
Ka/Ks Ratio 0.02559 (Ka = 0.0053, Ks = 0.2052)

Additional orthologs identified in other species via the OPTIC pipeline.

ITGB1 (Human)   Itgb1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2397 bp    Location:1224236..1250312   Strand:+
Raw sequence 
>bmy_04187
ATGAATTTACAACTGATTTTCTGGATTGGATTGATCAGTTCAGTTTGCTATGTGTTTGGCCAAGCAGATGAAAATAGATGTTTAAAAGCAAATGCCAAATCATGTGGAGAGTGTATACAAGCAGGGCCAAATTGTGGATGGTGCACAAATTCAACATTTTTACAAGAAGGAATGCCTACTTCTGCTCGATGTGATGATTTAGAAGCCTTAAGAAAGAAGGGCTGTCATCCAGATGACATCGAAAATCCCAGAGGCTCCAAAGAYATAAAGAAAAATAAAAATGTCACCAACCGTAGCAAAGGAACAGCAGAGAAGCTGCAGCCAGAAGATATTACTCAGATCCAACCACAGCAGTTGGTTTTGCAGTTACGATCAGGGGAGCCACAGACATTTACATTAAAATTCAAGCGAGCTGAAGACTATCCCATCGATCTCTACTACCTTATGGACCTCTCCTACTCTATGAAAGACGACTTGGAGAATGTGAAAAGTCTTGGAACTGATTTGATGAATGAAATGAGGAGGATTACTTCAGACTTCCGAATTGGGTTTGGCTCATTTGTGGAGAAAACCGTGATGCCTTACATTAGCACAACACCAGCTAAACTCAGGAACCCTTGCACAAGTGAACAGAACTGCACCAGCCCATTTAGCTATAAAAATGTGCTCAGCCTTACTGATAAAGGGGAGGTATTTAATGAACTTGTTGGTAAACAGCGCATATCTGGAAATTTGGATTCTCCAGAAGGTGGCTTTGATGCAATCATGCAAGTTGCAGTTTGTGGATCATTGATTGGCTGGAGGAATGTGACACGGCTGCTGGTGTTTTCCACGGATGCTGGGTTTCACTTTGCTGGAGATGGGAAACTTGGTGGCATTGTTTTACCAAATGATGGACAGTGTCACCTGGAAAATGATGTGTACACAATGAGCCATTATTATGATTACCCTTCTATTGCTCACCTTGTCCAAAAACTAAGCGAAAATAACATTCAGACGATTTTTGCAGTTACTGAAGAATTTCAGCCCGTTTACAAGGAACTGAAAAATTTGATCCCTAAGTCAGCAGTAGGAACATTATCTGCAAATTCCAGCAATGTAATTCAGTTGATCATCGATGCATACAATTCCCTGTCTTCAGAAGTCATTTTGGAAAACAGCAAATTACCAGAAGGAGTAACAATAAATTACAAGTCTTACTGCAAGAATGGGGTGAATGGAACAGGGGAAAATGGGAGAAAATGCTCTAATATTTCCATTGGGGATGAGGTTCAATTTGAAATCAGCGTAACTTCAAATAAATGTGCAAATAAGAATTCTGAAACCATTAAAATTAAGCCTCTGGGCTTCACTGAAGAAGTAGAGATTATTCTTCAGTTCATCTGTGAATGTGAATGCCAGAGTGAAGGCATCCCTGGCAGTCCCAAGTGCCATGATGGCAACGGGACCTTTGAGTGTGGAGCCTGCAGGTGCAACGAAGGACGTGTTGGGAGACATTGTGAATGTAGCACAGATGAGGTGAACAGTGAAGATATGGACGCTTACTGCAGGAAAGAAAACAGTTCAGAAATATGTAGCAACAACGGAGAATGTGTCTGTGGACAGTGTGTGTGTCGGAAGAGGGATAATACAAACGAAATTTATTCTGGCAAATTCTGCGAGTGTGATAATTTCAACTGTGATAGATCCAATGGCTTAATTTGTGGAGGAAATGGTGTCTGCAAGTGTCGTGTGTGTGAATGCAACCCTAACTACACTGGCAGTGCCTGTGACTGTTCTCTGGACACTACCTCCTGCACAGCTGTGAATGGGCAGATCTGCAATGGCCGGGGCGTCTGTGAGTGTGGCGCCTGTAAGTGTACAGATCCCAAGTTCCAAGGGCCAACCTGTGAGATGTGCCAGACCTGCCTTGGAGTCTGTGCCGAGCATAAAGAATGTGTTCAGTGCCGAGCCTTCAACAAAGGAGAAAAGAAGGACACGTGTGCTCAGGAATGTTCACATTTCAACATTACCAAGGTTGAAAATCGGGACAAATTGCCCCAGCCAGGCCAGGTCGATCCCCTGTCCCATTGTAAGGAGAAGGACGTTGACGACTGCTGGTTCTACTTCACATATTCAGTGAATGGGAACAATGAGGCCACTGTTCATGTTGTAGAGACTCCAGAGTGCCCCACTGGTCCAGACATTATTCCAATTGTAGCAGGTGTGGTTGCTGGAATTGTTCTTATTGGCCTTGCATTGCTGCTGATTTGGAAGCTTTTAATGATCATTCATGACAGAAGRGAATTTGCCAAATTTGAAAAGGAAAAAATGAATGCCAAATGGGACACGGGTGAAAATCCTATTTATAAGAGTGCTGTGACAACTGTTGTCAACCCGAAGTATGAGGGAAAATGA

Related Sequences

bmy_04187T0 Protein

Length: 799 aa      
>bmy_04187T0
MNLQLIFWIGLISSVCYVFGQADENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLEALRKKGCHPDDIENPRGSKDIKKNKNVTNRSKGTAEKLQPEDITQIQPQQLVLQLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTDKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENDVYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSSEVILENSKLPEGVTINYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISVTSNKCANKNSETIKIKPLGFTEEVEIILQFICECECQSEGIPGSPKCHDGNGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTTSCTAVNGQICNGRGVCECGACKCTDPKFQGPTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCAQECSHFNITKVENRDKLPQPGQVDPLSHCKEKDVDDCWFYFTYSVNGNNEATVHVVETPECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYEGK*