Part of scaffold_134 (Scaffold)

For more information consult the page for scaffold_134 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRRC9 ENSTTRG00000005464 (Bottlenosed dolphin)

Gene Details

leucine rich repeat containing 9

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005171, Bottlenosed dolphin)

Protein Percentage 95.5%
cDNA percentage 97.41%
Ka/Ks Ratio 0.86497 (Ka = 0.0243, Ks = 0.0281)

LRRC9 ENSBTAG00000003090 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000054662, Cow)

Protein Percentage 93.59%
cDNA percentage 95.5%
Ka/Ks Ratio 0.38618 (Ka = 0.0347, Ks = 0.0899)

LRRC9  (Minke Whale)

Gene Details

leucine rich repeat containing 9

External Links

Gene match (Identifier: BACU015389, Minke Whale)

Protein Percentage 75.68%
cDNA percentage 81.03%
Ka/Ks Ratio 0.49372 (Ka = 0.1965, Ks = 0.3981)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2202 bp    Location:447832..495613   Strand:+
>bmy_04197
ATGATTGAATGTGAAAACCTAAACCAAGAAGACATAATTAAAGAACTGTGCTTATGCAATGGTTTATCTTATGAGATGATTGGACAAGAAGGATCAGATACTTCAAAACTGGAAATGTTTTTCTCAGGGTATCCTCGTATAGTCGGATTATCATTATTTCCTAATTTAACAAGTCTCACAATTGTTGCTCAAGATATAAAAGAAATTTCAGGACTAGAAACATGTTTACGGCTTAAAGAACTTTGGCTTGCCGAATGCTGCATAGAGAAAATTGAAGGTATTCAAGAATGTAGAAATTTAGAAAAACTGTACTTATATTTTAATAAAATTTCTAAAATAGAAAATTTAGAGAAGTTATCCAGATTGGAGGTTCTTTGGCTGAACCACAATGCAATTAAAAATATTGAGGGCTTGCAAACTTTGAAGAATTTAAGTGATCTCAACCTTGCTGGAAATCTAATAAGCAGCATTGGTCGATGTCTTGATCCCAATGAACAACTAGAAAGATTAAACCTTTCTGGTAACCAAATATATTCTTTCAAGGACCTCACTAACTTAACCAGGCTGTGTCGCTTAAAGGATTTATGTCTCAATGATCCTCAGTATAAAACCAATCCAGTTTGTCTGCTGTGTAATTATTCCACACATGTGTTATATCATTTGCCTTGCCTTCAAAGACTTGACACGTTTGATGTGTCAGCAAAGCAAATCAAGGAACTGGCAGATACCACAGCAATGAAAAAAATAATGTATTACAATATGCGTATAAAAACTGTTCAGAGGCATCTTAATGAAGACCTTGAAAAACTGAATGATCGAAAATGTAAATTACAGAAGTTGCCAGAAGAACGAATAAAATTATTCAGCTTTTTGAAAAAAAATTTGGAACGGGAACTGACTGAACTCAGAGGATCTGGCAAAGGGCACAATGATAGACCCAGTAACAATAAAGTAACTGAGCTTGAAAAATCAAAAAACTGTGAAACTGTCACAGAAGAACCAAGTCTTCAACAGAAGATAGTGACCAAACTAAATGCCTTGAATGAAAGGGTAACATTCTGGAACAAAAAACTAGATGAAATTGAAGGAATTTATCGTATTGAAGTCAAACAAAAGAAGAAAAGTCATAGTTTATTAATCCCATTTTTGTTAATTGAGTTGGAGACTGTGGGAAACATCCACTTTGAAGAAGGCACTCGATCTGATGACTGGTTTAATTCCTGCTATGAATTAATTCTATCACGTTTTTGTACATGGGACTTCAGAACATATGGTATTACAGGAGTGAAAGTAAAACGTGTCATCAAGGTTAACAACCGTATTCTGAGACTAAAATTTGAAGAGAAATTCCAAAAGTTTTTGGACAATGAAGATATGCATGATTCAGAGAGCTATCGACAGATGCTGGAATGCCTTTTTTATGTTTTTGATCCTGAAGTTACAGTGAAGAAAAAGCATCTGCTACAAATACTTGAAAAAGGATTCAAAGACAGTGAAACGAGCAAGCTGCCTCTCAGAAAAGAAGCTGTTATTCTTGCTAACAGCCTAAGTATATGTGAGTGTCCCAGAATTGAATTTCTACAGCAAAAGTACAAGGATGAGAAGAAAAAATCTCTTGAGCATGAGCTCTTCAGACATGGCATCCTCCTGATTACAAAGGTTTTCCTTGGCCAGAGTGTTCAGGCTCGTGATCAGGACTCCATCAGTCAAGCCAACTACCCAATGATTAATTCAGTGTTCATTCCTCGAAAATATTTACTAAATCCTATCATGGGACAAAGAAACTGTGATTGCAGCATTCGGCAGTACAAGTGGTTTGTCTTTGATCATGACCTTGTCAAGGCTCACTCTTTATTTTCTGCATTCAACAATGTTATCCTAGAAGAAAGCAAAAAAAATTCAGAAGGATCAGTATTGTCCCAGGATTTGAAATTTGATGATGAAGTTATAAAAATGGATCCCAGGATCAAGCCCAGACCAAAACTTACTAGCTTGGATGATAAAACAATACTTTCCCTTGCCAAGACTAGCATTTACAGTCATATTGTGAGTCTGAATCTACATGGAAACAGCTTGAGTAAATTGAGAGATCTCTCCAAGTTAACAGGACTTCGAAAACTTAATATCAGCTTTAATGAATTTACTTGTTTAGATGATGTATGCCACCTGGTAAGAACTGTCTTTTTGAAATTATTTAAGTAA

Related Sequences

bmy_04197T0 Protein

Length: 734 aa      View alignments
>bmy_04197T0
MIECENLNQEDIIKELCLCNGLSYEMIGQEGSDTSKLEMFFSGYPRIVGLSLFPNLTSLTIVAQDIKEISGLETCLRLKELWLAECCIEKIEGIQECRNLEKLYLYFNKISKIENLEKLSRLEVLWLNHNAIKNIEGLQTLKNLSDLNLAGNLISSIGRCLDPNEQLERLNLSGNQIYSFKDLTNLTRLCRLKDLCLNDPQYKTNPVCLLCNYSTHVLYHLPCLQRLDTFDVSAKQIKELADTTAMKKIMYYNMRIKTVQRHLNEDLEKLNDRKCKLQKLPEERIKLFSFLKKNLERELTELRGSGKGHNDRPSNNKVTELEKSKNCETVTEEPSLQQKIVTKLNALNERVTFWNKKLDEIEGIYRIEVKQKKKSHSLLIPFLLIELETVGNIHFEEGTRSDDWFNSCYELILSRFCTWDFRTYGITGVKVKRVIKVNNRILRLKFEEKFQKFLDNEDMHDSESYRQMLECLFYVFDPEVTVKKKHLLQILEKGFKDSETSKLPLRKEAVILANSLSICECPRIEFLQQKYKDEKKKSLEHELFRHGILLITKVFLGQSVQARDQDSISQANYPMINSVFIPRKYLLNPIMGQRNCDCSIRQYKWFVFDHDLVKAHSLFSAFNNVILEESKKNSEGSVLSQDLKFDDEVIKMDPRIKPRPKLTSLDDKTILSLAKTSIYSHIVSLNLHGNSLSKLRDLSKLTGLRKLNISFNEFTCLDDVCHLVRTVFLKLFK*