Sequence detailsbmy_04201 (Coding sequence)

Part of scaffold_134 (SequenceType object (1))

For more information consult the page for scaffold_134 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PPM1AENSBTAG00000018127 (Cow)

Gene Details

Protein phosphatase 1A

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000024128, Cow)

Protein Percentage 99.48%
cDNA percentage 97.91%
Ka/Ks Ratio 0.02584 (Ka = 0.0023, Ks = 0.0888)

PPM1A (Minke Whale)

Gene Details

protein phosphatase, Mg2+/Mn2+ dependent, 1A

External Links

Gene match (Identifier: BACU015391, Minke Whale)

Protein Percentage 85.34%
cDNA percentage 88.31%
Ka/Ks Ratio 0.9687 (Ka = 0.1293, Ks = 0.1335)

Additional orthologs identified in other species via the OPTIC pipeline.

PPM1A (Human)   Ppm1a (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1245 bp    Location:730404..775548   Strand:+
Raw sequence 
>bmy_04201
ATGGTATTGTCCTCTTTACCAAATGATGCAAACTCAGATGCCGTGGTGGAAAAGTGGATGAAATGGTCTAGATATGACCTAGAGGATCAAGACATAATGGGAGCATTTTTAGACAAACCAAAGATGGAAAAACATAATGCCCAGGGGCAGGGTAATGGGTTGCGATATGGGCTAAGCAGCATGCAAGGCTGGCGAGTTGAAATGGAGGACGCACATACGGCTGTGATCGGTTTGCCAAGTGGACTTGAAACATGGTCATTCTTTGCTGTGTATGATGGGCATGCTGGTTCTCAGGTTGCCAAATACTGCTGTGAGCATTTGTTAGATCACATCACCAATAACCAGGATTTTAAAGGGTCTACAGGAGCACCTTCTGTGGAAAATGTAAAGAATGGAATCAGAACAGGTTTTCTGGAGATTGATGAACATATGAGAGTTATGTCAGAGAAGAAACATGGTGCTGATAGAAGTGGGTCAACAGCTGTGGGTGTCTTAATTTCTCCTCAACATACTTATTTCATTAACTGTGGAGACTCAAGAGGTTTGCTTTGTAGGAACAGGAAAGTTTACTTCTTCACACAAGATCACAAACCAAGTAATCCGCTGGAAAAAGAACGAATTCAGAATGCAGGTGGTTCTGTAATGATTCAGCGTGTGAATGGCTCTCTGGCTGTGTCGAGGGCGCTTGGGGACTTCGATTACAAATGTGTCCATGGAAAAGGTCCTACAGAGCAGCTTGTGTCACCAGAGCCTGAAGTCCATGATATTGAAAGATCTGAAGAAGATGATCAGTTCATTATTCTTGCATGTGATGGTATTTGGGATGTCATGGGAAATGAAGAGCTCTGTGATTTTGTAAGATCCAGACTTGAAGTCACTGATGACCTTGAGAAAGTTTGCAATGAAGTAGTCGACACCTGTTTGTATAAGGGAAGTCGAGACAACATGAGTGTGATATTGATCTGTTTTCCAAATGCACCCAAAGTATCGCCAGAAGCAGTGAAGAAGGAGGCAGAGTTGGACAAGTACCTGGAAAGCAGAGTAGAAGAAATCATAAAGAAGCAGGGGGAAGGCGTCCCTGACTTAGTCCATGTGATGCGTACATTAGCGAGTGAGAACATCCCCAGCCTCCCACCAGGGGGTGAATTGGCAAGCAAGCGGAATGTTATTGAAGCTGTTTACAATAGACTGAATCCATACAAAAATGATGACACTGACTCCACTTCAACTGATGATATGTGGTGA

Related Sequences

bmy_04201T0 SequenceType object (3)

Length: 415 aa      
>bmy_04201T0
MVLSSLPNDANSDAVVEKWMKWSRYDLEDQDIMGAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLETWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSTGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVYFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAPKVSPEAVKKEAELDKYLESRVEEIIKKQGEGVPDLVHVMRTLASENIPSLPPGGELASKRNVIEAVYNRLNPYKNDDTDSTSTDDMW*