Part of scaffold_134 (Scaffold)

For more information consult the page for scaffold_134 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SIX1 ENSBTAG00000012139 (Cow)

Gene Details

SIX1 protein; Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016104, Cow)

Protein Percentage 93.92%
cDNA percentage 94.68%
Ka/Ks Ratio 0.15395 (Ka = 0.029, Ks = 0.1881)

SIX1  (Minke Whale)

Gene Details

SIX homeobox 1

External Links

Gene match (Identifier: BACU015394, Minke Whale)

Protein Percentage 98.95%
cDNA percentage 98.77%
Ka/Ks Ratio 0.0718 (Ka = 0.0042, Ks = 0.058)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 846 bp    Location:1120449..1117011   Strand:-
>bmy_04204
ACAAGCAGCATCCACCCGGCGGGAGGCCGGAGCCAGCGAGGCCCGAAAAGCTGCGGAGTGAGCAGGACGCTCCTTGTCCAGCGCGCGTCCTACTCCTCCTCCACTAACTCGGCCGCCCGTCCCCAAGTCTCGACTCGCTTTTTAGCCTTCGCAAAGCCTAGGGAGGGGGTTAGGAGCAGCCGCGCCCCCCTCCCTGCGGCTGCCTCCTCCTGCTTTTTCGGCTTTGCTCCCTGCCGCGTGCGCCAGGGCAGTGCGCCCCGGCAGGCCCCAGCCATGTCGATGCTGCCATCGTTCGGCTTCACGCAGGAGCAAGTGGCGTGCGTATGCGAGGTTTTGCAGCAAGGCGGGAACCTGGAGCGCCTGGGCAGGTTCCTGTGGTCGCTGCCCGCCTGCGACCACCTGCACAAGAACGAAAGCGTGCTCAAGGCCAAGGCCGTGGTCGCCTTCCACCGCGGCAACTTCCGCGAGCTCTACAAGATCCTGGAGAGCCACCAGTTCTCGCCTCACAACCACCCCAAGCTGCAACAACTGTGGCTGAAGGCGCACTACGTGGAGGCCGAGAAGTTGCGCGGCCGGCCCCTGGGCGCGGTGGGCAAATATCGGGTGCGCCGAAAATTCCCGTTGCCGCGCACCATCTGGGACGGCGAAGAGACCAGCTACTGCTTCAAGGAGAAGTCGCGGGGCGTGCTGCGGGAGTGGTACGCGCATAACCCCTACCCCTCGCCGCGTGAGAAGCGGGAGCTGGCCGAGGCCACCGGCCTCACCACCACCCAAGTCAGCAACTGGTTTAAGAACCGAAGGCAAAGAGACCGGGCCGCCGAGGCCAAGGAAAGGTACGCGGAGTGA

Related Sequences

bmy_04204T0 Protein

Length: 282 aa     
>bmy_04204T0
TSSIHPAGGRSQRGPKSCGVSRTLLVQRASYSSSTNSAARPQVSTRFLAFAKPREGVRSSRAPLPAAASSCFFGFAPCRVRQGSAPRQAPAMSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERYAE*