Part of scaffold_138 (Scaffold)

For more information consult the page for scaffold_138 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRMU ENSTTRG00000004160 (Bottlenosed dolphin)

Gene Details

tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003915, Bottlenosed dolphin)

Protein Percentage 90.91%
cDNA percentage 91.69%
Ka/Ks Ratio 0.31662 (Ka = 0.0591, Ks = 0.1867)

TRMU ENSBTAG00000005595 (Cow)

Gene Details

mitochondrial tRNA-specific 2-thiouridylase 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007346, Cow)

Protein Percentage 87.1%
cDNA percentage 86.22%
Ka/Ks Ratio 0.17329 (Ka = 0.0771, Ks = 0.4452)

TRMU  (Minke Whale)

Gene Details

tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase

External Links

Gene match (Identifier: BACU013482, Minke Whale)

Protein Percentage 82.66%
cDNA percentage 85.19%
Ka/Ks Ratio 0.52859 (Ka = 0.1384, Ks = 0.2618)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1389 bp    Location:677847..656936   Strand:-
>bmy_04224
ATGGCGGCGGCGTCCGCACTTAGCCTGGGGAGCCCTGACCTCTGCGGGCACAGCAGCCTCCGTGGTGGTGCTTGTCCTTACGACACACGACATGGCCGTCAGGCAACGTTGATTTCATRTACTCTCTTTAATTTGTCCTTCGCCCCTCCCCCAGGTTACCAGGTGACAGGGGTGTTTATGAAGAACTGGGACTCGCTGGATGAGCATGGAGTTTGCACGGCTGACAAAGACTGCGAAGATGCTTACAGAGTTTGCCAAATCCTAGACATCCCCTTCCATCAAGTGTCCTACGTGAAGGAGTATTGGAATGACGTGTTCAGTGATTTTTTAAATGAATATGAAAAAGGAAGAACTCCCAATCCTGACATAGTCTGCAACAAGCATATCAAATTCAGTTGTTTTTTTAATTACGCTGTGGATAATCTTGGAGCAGATGCAGTCGCTACGGGTCACTATGCAAGAACGTCCCTGGAAGATGAAGAGGTCTTCCAGCAGAAGCGCATTAAGAGGCCGGAAGGGCTTTTCAGAAATCGATTTGAAATTAGAAATGTGGTAAAACTTCTCCAAGCAGCTGACAGCTTTAAAGACCAGACCTTCTTTCTCAGCCAGGTTTCCCAGGATGCCCTGAGGAGAACCCTCTTCCCCCTGGGGGGATTAACGAAAGATTTTGTAAAGAAAATAGCTGCTGAGAATAGTCTTCATCATGTGCTTCAGAAAAAAGAGGCACTGTACCGCTGGCCTCTGAGGACCCGGGAAGCCATCCCTTCGCCCTTATCATCTCTGCTCGTGTCTCTACCTGCTCGGTTTCTGGCTGTGGCTGGCTCTCCAGGTGGAGTGCAGGACCCCACCCGGCCATTCGTCTCACGGTCGGCCCTCCTTTCATTTCAGAGCATGGGCATCTGTTTCGTTGGTAAAAGAAATTTTGAAAATTTCATTCTTCAGTATTTACAGCCTCGACCTGGTAAATTTATTTCTATAGAAGACAATAAAGTTCTGGGAACGCATAAAGGTGAGATGCAACCCTGGGCTGCTTTTCATCCTAAGCTCCTTGAGGCGTGGGGCAAGTTTGAGCTCTGGGAATTTAGACGAGATGCTTCCAGGCCCTCAGGGACCGGTGTGGGTGGCACCAGGGAAGGTTGGTTCCTGTATACTTTGGGCCAGAGAGCCAACATAGGTGGCTTACGGGAGCCCTGGTACGTGGTGGAGAAGGACGGCGCCAGGGGCGACGTGCTCGTGGCCCCCCGGACAGACCACCCAGCCCTGTACAGGGACCTGCTGCGGACCGGCCGCGTGCACTGGGTGGCGGAGGAGCCGCCCGCAGCCCTGGTCCGCGACAAGATGATGGAGTGCCACTTCCGGTTCCGCCACCAGATGGCGCTAGGTGACTGA

Related Sequences

bmy_04224T0 Protein

Length: 463 aa      View alignments
>bmy_04224T0
MAAASALSLGSPDLCGHSSLRGGACPYDTRHGRQATLISXTLFNLSFAPPPGYQVTGVFMKNWDSLDEHGVCTADKDCEDAYRVCQILDIPFHQVSYVKEYWNDVFSDFLNEYEKGRTPNPDIVCNKHIKFSCFFNYAVDNLGADAVATGHYARTSLEDEEVFQQKRIKRPEGLFRNRFEIRNVVKLLQAADSFKDQTFFLSQVSQDALRRTLFPLGGLTKDFVKKIAAENSLHHVLQKKEALYRWPLRTREAIPSPLSSLLVSLPARFLAVAGSPGGVQDPTRPFVSRSALLSFQSMGICFVGKRNFENFILQYLQPRPGKFISIEDNKVLGTHKGEMQPWAAFHPKLLEAWGKFELWEFRRDASRPSGTGVGGTREGWFLYTLGQRANIGGLREPWYVVEKDGARGDVLVAPRTDHPALYRDLLRTGRVHWVAEEPPAALVRDKMMECHFRFRHQMALGD*