Part of scaffold_138 (Scaffold)

For more information consult the page for scaffold_138 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TTC38 ENSTTRG00000004155 (Bottlenosed dolphin)

Gene Details

tetratricopeptide repeat domain 38

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003911, Bottlenosed dolphin)

Protein Percentage 88.43%
cDNA percentage 90.32%
Ka/Ks Ratio 0.37816 (Ka = 0.079, Ks = 0.209)

TTC38 ENSBTAG00000003017 (Cow)

Gene Details

tetratricopeptide repeat protein 38

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000049933, Cow)

Protein Percentage 77.42%
cDNA percentage 80.0%
Ka/Ks Ratio 0.29056 (Ka = 0.1675, Ks = 0.5764)

TTC38  (Minke Whale)

Gene Details

tetratricopeptide repeat domain 38

External Links

Gene match (Identifier: BACU013480, Minke Whale)

Protein Percentage 91.07%
cDNA percentage 91.94%
Ka/Ks Ratio 0.41077 (Ka = 0.0667, Ks = 0.1624)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1713 bp    Location:734355..710399   Strand:-
>bmy_04226
ATGGCCGCGGCCGCACCCCTGCGCGACTGCCAGGCTTGGAAGGATGCCGGGCTCCCTCTTTCAACCCCAAGCAACGAGGCCTGCAGGCTGTTTGATGCCACCCTGACCCAGTACGTAAAATGGACCAATGACCAGAGTCTTGGTGGCATTGAGGGCTGCCTGTCAAAGCTCAAAGCAGCAGATCCGACCTTCGCCCTGGGCCACGCCATCGCTAATGGCCTCATTCTGATTGGCACCGGAAGCTCCGTGAGGCTGGACAAAGAGCTGGACCTGGCCGTGAAGACGATGGTGGAGATTTCCAAAGCTCAGCCCCTGACGCAGCGGGAACGGCTGCACGTGTCTGCAGTAGAGACCTTTGCCAAGGGGAACCTTCCAAAAGCCTGTGAGCTGTGGGAACAGATTCTCCAGGACTACCCAACAGACATGTTGGCCCTGAAATTTTCCCACGATGCCTATTTTTACCTGGGCTACCAGGAACAGATGCGAGATTCTGTGGCTCGAATTTATCCCTTCTGGACACCCGACATCCCCCTTAGCAGCTACGTGAAAGGCATCTATTCTTTCGGACTGATGGAAACCAACTTCTACGATCGGGCGGAAAAGCTCGCCAAAGAGGCTTTATCTGTTAACCCGACGGACGCGTGGTCGGTGCACACCGTTGCCCATATTCATGAGATGAAAGCAGAGGTCCAGGATGGATTGGAGTTCATGCAGCGCTCAGAAACCCACTGGAAGGACTCTGATATGCTTGCTTGTCATAATTATTGGCACTGGGCTTTATATCTGATTGAAAAGGGCGAATACGAGGCCGCATTGACCATTTATGATGACCACATCCTCCCCAGCCTGCGGGTCAGCGGGGCAATGCTGGACGTGGTGGACAGCTGCTCCATGCTCTACCGGTTGCAGATGGAAGGGGTGTCTGTGGGTGAGCGGTGGCAAGATGTCCTGTCTGTGACCCAGAAGCACAGCCGAGACCACATCCTGCTCTTCAACGACGTGCACTTCCTGATGGCGTCCCTGGGCGCTGGGGACTCCCGGACCACGCAGGAGCTGCTGACCACCCTGCGGGATGCCAGCGAGTCCCCGGGGGAGAACTACCAGCACCTCCTGGCCCGTGACGTGGGGCTGCCCTTGTGCCAGGCCCTGGTGGAGGCCCAGAGCGGGAACCCCGACGGCGTGGTGGAACTGCTCCAGCCCATCCGCTACCGGCTTGTCCAGATCGGAGGCAGCAACGCCCAGGTGAGCCAGCAGCTGCAGCGCGAGGGCCCCAGTCCGGGAGCCCCTGTGCCCCACAGCCTCTATCTCCGCGGTGTTGGCGCCCACGGCATGGGAGAGTCCTTGTCGTTCACATCCCCCAGTAAGCTTGTCCCTGAGAACAGGCCAGCCTGCAGCGGGGAGGGGGCAGGCGTCCCCATCCCTTGTCCCACGTCACAGAGCCTCACGTGCCCACTTGACCTTTCAGAGAGACGTCTTCAACCAGTTACTGATTCACGCGGCCTTAAACTGCTCGTCCGGCATCCACAAGAACGTGGCCCGGAGCCTTTTGATGGAGCGAGATGCCTTGAAGCCCAACTCCCCACTGACTGCGAGGCTCATCCGCAGGGCAGCCGCCATCCACCTCCTGCAGTGAGCCGGCCTGGCCGCCTGCCCCGCGGAGCCTCCCCGGCCATCGGACCAGCTGCCACACTGGCTTCGCAGGGTTACAAGTAG

Related Sequences

bmy_04226T0 Protein

Length: 571 aa      View alignments
>bmy_04226T0
MAAAAPLRDCQAWKDAGLPLSTPSNEACRLFDATLTQYVKWTNDQSLGGIEGCLSKLKAADPTFALGHAIANGLILIGTGSSVRLDKELDLAVKTMVEISKAQPLTQRERLHVSAVETFAKGNLPKACELWEQILQDYPTDMLALKFSHDAYFYLGYQEQMRDSVARIYPFWTPDIPLSSYVKGIYSFGLMETNFYDRAEKLAKEALSVNPTDAWSVHTVAHIHEMKAEVQDGLEFMQRSETHWKDSDMLACHNYWHWALYLIEKGEYEAALTIYDDHILPSLRVSGAMLDVVDSCSMLYRLQMEGVSVGERWQDVLSVTQKHSRDHILLFNDVHFLMASLGAGDSRTTQELLTTLRDASESPGENYQHLLARDVGLPLCQALVEAQSGNPDGVVELLQPIRYRLVQIGGSNAQVSQQLQREGPSPGAPVPHSLYLRGVGAHGMGESLSFTSPSKLVPENRPACSGEGAGVPIPCPTSQSLTCPLDLSERRLQPVTDSRGLKLLVRHPQERGPEPFDGARCLEAQLPTDCEAHPQGSRHPPPAVSRPGRLPRGASPAIGPAATLASQGYK*