Sequence detailsbmy_04228 (Coding sequence)

Part of scaffold_138 (SequenceType object (1))

For more information consult the page for scaffold_138 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CDPF1ENSBTAG00000008065 (Cow)

Gene Details

UPF0595 protein C22orf40 homolog

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000010609, Cow)

Protein Percentage 83.47%
cDNA percentage 90.08%
Ka/Ks Ratio 0.41765 (Ka = 0.0859, Ks = 0.2058)

Additional orthologs identified in other species via the OPTIC pipeline.

CDPF1 (Human)   Cdpf1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 372 bp    Location:753852..756070   Strand:+
Raw sequence 
>bmy_04228
ATGGCGTGTGAGGCGGAGCGCCGCCCCTTGGGTGTGTTTGAGTGCCAGCTCTGTGCCTTAACAGCTCCATATAGCTACGTGGGGCAGCAGCCCCCCGGCACCCAGTCTGTCGTCCTCCTGGAGGAGAGCTACGTCATGAGGGACCCCTTCACCCCCAACAAGGACAGATTCCTGATCCTCGGCTCGAGATGCGGCTTATGCGGCAGGCTGGTGTGCGTGGGCCCGGAATGCAGTTTATTCTACTCCAAGAGATTTTGCCTCCCCTGTGTCCGGGAGAACATTGATGCTTTCCCTCAGGAAATTCAGCAAGACTTGGAGAAAAGGAAAGTCCCATCCAAGAGGCCTGCCAGCCAGCCTGGTTCTCGAACATGA

Related Sequences

bmy_04228T0 SequenceType object (3)

Length: 124 aa      
>bmy_04228T0
MACEAERRPLGVFECQLCALTAPYSYVGQQPPGTQSVVLLEESYVMRDPFTPNKDRFLILGSRCGLCGRLVCVGPECSLFYSKRFCLPCVRENIDAFPQEIQQDLEKRKVPSKRPASQPGSRT*