Part of scaffold_142 (Scaffold)

For more information consult the page for scaffold_142 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNX20 ENSTTRG00000013381 (Bottlenosed dolphin)

Gene Details

sorting nexin 20

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012695, Bottlenosed dolphin)

Protein Percentage 95.89%
cDNA percentage 97.36%
Ka/Ks Ratio 0.26642 (Ka = 0.0174, Ks = 0.0654)

SNX20 ENSBTAG00000003961 (Cow)

Gene Details

Sorting nexin-20

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005164, Cow)

Protein Percentage 88.92%
cDNA percentage 90.72%
Ka/Ks Ratio 0.14049 (Ka = 0.0537, Ks = 0.3825)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1098 bp    Location:164652..168346   Strand:+
>bmy_04250
ATGGCAAGTCCCAAGCATGCCAGGAGCCCTGGATGGACAAGACCCATATCCCAGTGCATGGCAGGGACCAAGCCGAAAGCATCAGCCCCTGGCCCAGACCTCCCACGTCCAGGACCTGAAGAGCACTTAGGTGGGCTTGAGGTGGGATGGAGGAGGGGGATATTCACAGCGCTTCCAGATTCCCACGGCTCATCCCAGACAGACCCAGCCATCTCCCCAAGCCCTTGCCCCCAAAGCACACTGACCTGTGCTATCCTTAAGCGCGTGGTCCTTCCAGATGCCCACGGCAGCCAGAGCTCCAACTCCAGCATGACCACGCGGGAGCTGCAGGAGTACTGGCGGACCCAGAAACGCTGCTGGAAGCACGTCAAACTGCTCTTCGAGATCGCTTCCGCCCGCATCGAGGAGGGGAGAGTCTCCAAGTTTGTGATGTACCAAATCGTCGTCATCCAGACGGGGAGTTTTGACAGCAACAAAGCCATCCTGGAACGGCGTTATTCAGACTTCGAGATGCTCCAGAAGAAACTCCTAAAGACCTTCCGGGAAGAGATCGAAGATGTCGTCTTCCCCAAAAAGCACCTGATGGGGAACTTCACCCCGGAGATGATCTCCGAGCGCAAGCTGGCCCTCAAAGAGTACCTAGGCCTGCTCTACGCCATCCGCTGCGTGCGCCGCTCRCGCGAGTTCATCGATTTCCTCACGCGGCCCGAGCTGAAGGAGGCCTTCGGCTGCCTGCGCGCTGGGCAGTACACCAAGGCCCTGGACATCCTGGTGCGCACGGTGCCGCTACAGGAGAAGCTGGCATCCCACTGCCCCGTGATGGTGGTGCCATCCCTGTGCGCCATGCTGGTGTGCCACCGCGACCTGGAGCGCCCCGCCGAGGCCTTCGCCGCCGGGGAGAGGGCTCTGCAGTGCCTGCAGGCCCGGGAGGGCCACCGTTACTACGCCCCGCTGCTGGACGCCATGGCCCGCCTGGCCTACGCGCTGGGCAAGGACTTTGTGTCCCTGCAGAAGAGACTGGAGGAGAACCAGCTCCGGAAGCCCGCCTCCCGGGGCTTCACCCTGAAGGAACTCACCGTCCAAGAGTATCTGTACTGA

Related Sequences

bmy_04250T0 Protein

Length: 366 aa      View alignments
>bmy_04250T0
MASPKHARSPGWTRPISQCMAGTKPKASAPGPDLPRPGPEEHLGGLEVGWRRGIFTALPDSHGSSQTDPAISPSPCPQSTLTCAILKRVVLPDAHGSQSSNSSMTTRELQEYWRTQKRCWKHVKLLFEIASARIEEGRVSKFVMYQIVVIQTGSFDSNKAILERRYSDFEMLQKKLLKTFREEIEDVVFPKKHLMGNFTPEMISERKLALKEYLGLLYAIRCVRRSREFIDFLTRPELKEAFGCLRAGQYTKALDILVRTVPLQEKLASHCPVMVVPSLCAMLVCHRDLERPAEAFAAGERALQCLQAREGHRYYAPLLDAMARLAYALGKDFVSLQKRLEENQLRKPASRGFTLKELTVQEYLY*