Sequence detailsbmy_04256 (Coding sequence)

Part of scaffold_142 (SequenceType object (1))

For more information consult the page for scaffold_142 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HEATR3 (Minke Whale)

Gene Details

HEAT repeat containing 3

External Links

Gene match (Identifier: BACU001879, Minke Whale)

Protein Percentage 94.22%
cDNA percentage 95.7%
Ka/Ks Ratio 0.66852 (Ka = 0.04, Ks = 0.0598)

Additional orthologs identified in other species via the OPTIC pipeline.

HEATR3 (Cow)   HEATR3 (Human)   Heatr3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2040 bp    Location:685573..648466   Strand:-
Raw sequence 
>bmy_04256
ATGGGCAAGAGCCGGACGAAACGCTTCAAGCGACCTCAGTTCTCCCCTACGGGCGACTGTCAGGCCGAGGCGGCGGCGGCGAACGGGACTGAGCCAGAGGAGGACGACGGGCCAGCGGCGGAGCTGCTAGAAAAACTCCAGCACCCGAGCGCCGAGGTCCGCGAGTGCGCCTGCGCGGGGCTGGCCCGGCTGGTGCAGCAGCGGCCGGCGCTGCCGGGCCTGGCTCGCCGGGACGCCGTGCGACGCCTCGGGCCGCTGTTGCTCGACCCCAGCCTGGCGGTGAGGGAGACGGCGGCTGGCGCACTGAGAAATCTCAGTGCTTGTGGCGGTTTCGAAGTTTGTGATGACATGGTGACCAAGGATATCATGACTCCGCTGGTCGCACTGCTGAAAGAGTGTAGTACTGGACTGGATTCAAATGAGATGTCTCCACAGGAAACAAAAGATCAGAACAGAAATTCTATTGAAAACATAGCCAATGAGGCGGTAAACGTGCTGTGGAATATATGTGAATGCAGTAGTAGAGCAGTATCTATATTCAACAAAGAAGGGTGTTTGGAGATTGTATTAAAGTATTTAAGTAGGTTTTCCACCAATGTTGACCTGGCTATTTCAGTAGCATATTGTTTGCAGACGGTGACCGAAGATAACCCAGAGCTACTGAAATCTTTCAGTGCCCCAGCATTGCATGTGCTGGAATCAGCAATGCTTTCTCCTGTCAATTCCATGGAATATATTCTATTAAAGACATTGGTGGCAGGCACAATTTGGAATCTAAAGGACATTATTCCATCCAAGAGTCAGGCAGAAATCATAAATGCCATACTAAAGATCTTATCTGAAGTTCTGGAAATGGATGCTGGTGAAACGGTTATTCAAATGATGGAGACCGAAACTCAAAGGATAAAAACTGCTGCAGAGACTGAGGACACATTACAGAATGTTAATGGTGATGATTTGATTGAGGATGATGAAATGGAAGAAATTCCTCATAGAAGGAAAGTCAGAAGGAAAACTTTCATTTCAGATTTACTTCCACCCACCGACAAGGAGCTGAGAGAGACCATAGCGTTGCTGACAGCTCAGCAGACTGCTCTGGAAATCATTGTCAACATGTGCTGCAGTGAAGATCCCACCGACGATGAATGGGAAGAGCTTTCCAGCAGTGATGAAAGCGACACGTTTATGGAGAATTCCCTCAGTGAATGCGGTGGGCAGCTGCTGTCTCCCCTCTGCCTCTCCCATGAGGTTCACACCGCTCTCACCAACTACCTCGTCCCAAAGAAGATTTTTGAGAAAACTGCCTTTCCAAACAGCATTGCAGTTGACGTGTGTTCTAGGAACCCAAGTTGGAAACCTTTGATTAGAAAAATGAGCACTATACAATGCAGAGCCCTCGTGTGTCTCCAGAGCCTTGTCTCCCTCCTGGATGTGGACCATCTGGGAGGACCTGCAGCCCTTCAGACACTTGCACAGCATCTGTCACAACTGCTTTTTTCTCAGCCAGATTTTGCTAAGCATGTTGACTTTTTAGAGGCCATAAGTAGTGCCTTGAGGGCCCTTTTGCAAACAATGGCCTCCAAGAACATTCCTCAGTGCATGACTCCCGACCAGCTGATGACACTATGCAGAGCAGGCATCCATAGTAGTAATGTTGGGGTGAGGGTAAATGTGGTTAGTATTTTAGGAATCACTGGCAGCGTCCTAGCCAAAGAAGATGGCACACTTGACACTCTTAAGACCATCGGGTGCTTTCTGCTTGAGGTTGCCACCAAAGATCCCTCCCTTGTAGTAGCAGGAGAGGCTTTGGATGCCCTCTTTGATGTTTTTGCAGATGGTAAAGAAGCTGAAAGGGCCTCAGTTCAAATTAAATTGTTATCTGCTCTGAAAGAATTCCAGCCAGTCTTCAAAATGAAGATACGGAAAGAAGGGAGAGCTAAATACAGTCCAGATCAGCTGTGTGTTCTCGACAACGTGAAGATGAACTTGAGAAGGTTTGTCGCTTATCAAGAAACTGTTGAGAAAAGACTGACTACTTGA

Related Sequences

bmy_04256T0 SequenceType object (3)

Length: 680 aa      
>bmy_04256T0
MGKSRTKRFKRPQFSPTGDCQAEAAAANGTEPEEDDGPAAELLEKLQHPSAEVRECACAGLARLVQQRPALPGLARRDAVRRLGPLLLDPSLAVRETAAGALRNLSACGGFEVCDDMVTKDIMTPLVALLKECSTGLDSNEMSPQETKDQNRNSIENIANEAVNVLWNICECSSRAVSIFNKEGCLEIVLKYLSRFSTNVDLAISVAYCLQTVTEDNPELLKSFSAPALHVLESAMLSPVNSMEYILLKTLVAGTIWNLKDIIPSKSQAEIINAILKILSEVLEMDAGETVIQMMETETQRIKTAAETEDTLQNVNGDDLIEDDEMEEIPHRRKVRRKTFISDLLPPTDKELRETIALLTAQQTALEIIVNMCCSEDPTDDEWEELSSSDESDTFMENSLSECGGQLLSPLCLSHEVHTALTNYLVPKKIFEKTAFPNSIAVDVCSRNPSWKPLIRKMSTIQCRALVCLQSLVSLLDVDHLGGPAALQTLAQHLSQLLFSQPDFAKHVDFLEAISSALRALLQTMASKNIPQCMTPDQLMTLCRAGIHSSNVGVRVNVVSILGITGSVLAKEDGTLDTLKTIGCFLLEVATKDPSLVVAGEALDALFDVFADGKEAERASVQIKLLSALKEFQPVFKMKIRKEGRAKYSPDQLCVLDNVKMNLRRFVAYQETVEKRLTT*