Part of scaffold_133 (Scaffold)

For more information consult the page for scaffold_133 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHAT ENSTTRG00000014721 (Bottlenosed dolphin)

Gene Details

choline O-acetyltransferase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013960, Bottlenosed dolphin)

Protein Percentage 71.79%
cDNA percentage 77.68%
Ka/Ks Ratio 0.55803 (Ka = 0.2368, Ks = 0.4243)

CHAT ENSBTAG00000016814 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022369, Cow)

Protein Percentage 68.39%
cDNA percentage 73.69%
Ka/Ks Ratio 0.3745 (Ka = 0.259, Ks = 0.6917)

CHAT  (Minke Whale)

Gene Details

choline O-acetyltransferase

External Links

Gene match (Identifier: BACU007601, Minke Whale)

Protein Percentage 72.86%
cDNA percentage 78.04%
Ka/Ks Ratio 0.54981 (Ka = 0.2312, Ks = 0.4204)

Genome Location

Sequence Coding sequence

Length: 1683 bp    Location:1197956..1219674   Strand:+
>bmy_04277
ATGGTGTCTCATTTGCCTTTCAGTCCCCAGGACATGGCCCAAAACCCTGAAGTGGACCAGATGAGGCAGGAAAGTCCAAGAGGCCACGTGGAAGGATTTGCAAGAGGAGGGAGGAAGGGGATAGTGGGGACTGCAGACTCCTGTCACTCGAGGACGTCTGTGGACCCCTCTCATGAACCTGGAGAAATCACCCTGGCACGGACAAATGAACTTGCTTATGTGCCAGATGTGGCCTGCAGGTGTGAGTGGAGGGTGCCGTTGGATGGGGGAATTGGAGCTCCTTCTCTGGCACAGAACTGGCTACAGCTGAAGGGCAGGACTCTTGCAGGGACCCTGAGGGTGAGCTGGTCCCTGGGGTTAGCACAGAAGCTCAGGACAGTCAGGCTGACTTCCCGGCCCACCCCCTGGGTGGTGGGGGACTCAGGCCTGGCTCAAGATCTGGGTGTCCATACGTGTGTCCGCCTGTTGCGTGTGGGGCTCTGCAGAGGGGACCCCAGGCCCGGGGCAGGGCAGGTGCTAAGTAAGGCCGTGCTTGCCTGCCCTGCAGACTCCACCAACAGGGACTCTCTGGATATGATCGAGCGCTGCATCTGCCTGGTGTGCTTGGATGCCCCGGGAGGCATGGAGCTCAGCGACACCAACAGGGCACTCCAGCTCCTCCACGGCGGAGGCTGCAGCAAGAATGGGGCCAACCGCTGGTACGACAAGTCCCTGCAGTTTGTGGTGGGACGAGACGGCACCTGTGGCGTGGTGTGCGAACACTCCCCATTCGACGGCATCGTCCTGGTGCAGTGCACAGAGCATCTGCTCAAGCACATGGTGAAGACCAGCAGGAAGATGGTCCGAGCCGACTCGGTCAGCGAGCTCCCAGCACCCAGGAGACTGAGGTGGAAATGTTCCCCGGAAATTCAAGGCCTCTTAGCCACCTCGGCAGAAAAACTTCAACAAATAGTAAAGAATCTCGACTTCATCGTTTATAAATTTGACGACTATGGGAAAACATTCATTAAGCAGCAGAAGTGCAGCCCCGATGCCTTTATTCAGGTGGCCCTCCAGCTGGCCTTCTATAGGCTCCACAGGAGACTCGTGCCCACCTACGAGAGCGCGTCCATCCGTCGGTTCCACGAGGGACGGGTGGACAACATTCGATCAGCCACTCTGGAGGTGCTGCGTTTTGTGAAAACCATCACTGACCACACGGCCACCGTGCCGGATTCAGAGAAGCTACTGCTCCTGAAGGATGCCATCCGAGCCCAGACCGAGTACACAGTCATGGCCATAACAGGGATGGCCATTGACAACCACCTGCTGGGGCTGCGGGAGCTGGCTCGGGAAGTGTGCAAGGAACTGCCCGAGATGTTCACGGATGAAACATACCTGATGAGCAACCGGTTTGTCCTCTCCACCAGCCAGGTGCCCACCACCATGGAGATGTTTTGCTGCTATGGTCCTGTGGTACCCAATGGCTATGGCGCCTGCTACAACTCCCAGCCAGAGAGCATCCTTTTCTGCATCTCCAGCTTCCATGGCTGCAAAGAGACCTCTTCAACCAAGTTTGCAAAAGCTGTGGAAGAAAGCCTCATTGAAATGAGAGGCCTCTGCAGTCGGCCACCGTGTGCCACGGGCAAGCCACTGGTGAAAAAGGAAAAAGTAACAAGGCCCAGCCAGGGGCACCAACCTTGA

Related Sequences

bmy_04277T0 Protein

Length: 561 aa      View alignments
>bmy_04277T0
MVSHLPFSPQDMAQNPEVDQMRQESPRGHVEGFARGGRKGIVGTADSCHSRTSVDPSHEPGEITLARTNELAYVPDVACRCEWRVPLDGGIGAPSLAQNWLQLKGRTLAGTLRVSWSLGLAQKLRTVRLTSRPTPWVVGDSGLAQDLGVHTCVRLLRVGLCRGDPRPGAGQVLSKAVLACPADSTNRDSLDMIERCICLVCLDAPGGMELSDTNRALQLLHGGGCSKNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMVKTSRKMVRADSVSELPAPRRLRWKCSPEIQGLLATSAEKLQQIVKNLDFIVYKFDDYGKTFIKQQKCSPDAFIQVALQLAFYRLHRRLVPTYESASIRRFHEGRVDNIRSATLEVLRFVKTITDHTATVPDSEKLLLLKDAIRAQTEYTVMAITGMAIDNHLLGLRELAREVCKELPEMFTDETYLMSNRFVLSTSQVPTTMEMFCCYGPVVPNGYGACYNSQPESILFCISSFHGCKETSSTKFAKAVEESLIEMRGLCSRPPCATGKPLVKKEKVTRPSQGHQP*