Sequence detailsbmy_04277 (Coding sequence)

Part of scaffold_133 (SequenceType object (1))

For more information consult the page for scaffold_133 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHATENSTTRG00000014721 (Bottlenosed dolphin)

Gene Details

choline O-acetyltransferase

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013960, Bottlenosed dolphin)

Protein Percentage 71.79%
cDNA percentage 77.68%
Ka/Ks Ratio 0.55803 (Ka = 0.2368, Ks = 0.4243)

CHATENSBTAG00000016814 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022369, Cow)

Protein Percentage 68.39%
cDNA percentage 73.69%
Ka/Ks Ratio 0.3745 (Ka = 0.259, Ks = 0.6917)

CHAT (Minke Whale)

Gene Details

choline O-acetyltransferase

External Links

Gene match (Identifier: BACU007601, Minke Whale)

Protein Percentage 72.86%
cDNA percentage 78.04%
Ka/Ks Ratio 0.54981 (Ka = 0.2312, Ks = 0.4204)

Genome Location

Sequence SequenceType object (2)

Length: 1683 bp    Location:1197956..1219674   Strand:+
Raw sequence 
>bmy_04277
ATGGTGTCTCATTTGCCTTTCAGTCCCCAGGACATGGCCCAAAACCCTGAAGTGGACCAGATGAGGCAGGAAAGTCCAAGAGGCCACGTGGAAGGATTTGCAAGAGGAGGGAGGAAGGGGATAGTGGGGACTGCAGACTCCTGTCACTCGAGGACGTCTGTGGACCCCTCTCATGAACCTGGAGAAATCACCCTGGCACGGACAAATGAACTTGCTTATGTGCCAGATGTGGCCTGCAGGTGTGAGTGGAGGGTGCCGTTGGATGGGGGAATTGGAGCTCCTTCTCTGGCACAGAACTGGCTACAGCTGAAGGGCAGGACTCTTGCAGGGACCCTGAGGGTGAGCTGGTCCCTGGGGTTAGCACAGAAGCTCAGGACAGTCAGGCTGACTTCCCGGCCCACCCCCTGGGTGGTGGGGGACTCAGGCCTGGCTCAAGATCTGGGTGTCCATACGTGTGTCCGCCTGTTGCGTGTGGGGCTCTGCAGAGGGGACCCCAGGCCCGGGGCAGGGCAGGTGCTAAGTAAGGCCGTGCTTGCCTGCCCTGCAGACTCCACCAACAGGGACTCTCTGGATATGATCGAGCGCTGCATCTGCCTGGTGTGCTTGGATGCCCCGGGAGGCATGGAGCTCAGCGACACCAACAGGGCACTCCAGCTCCTCCACGGCGGAGGCTGCAGCAAGAATGGGGCCAACCGCTGGTACGACAAGTCCCTGCAGTTTGTGGTGGGACGAGACGGCACCTGTGGCGTGGTGTGCGAACACTCCCCATTCGACGGCATCGTCCTGGTGCAGTGCACAGAGCATCTGCTCAAGCACATGGTGAAGACCAGCAGGAAGATGGTCCGAGCCGACTCGGTCAGCGAGCTCCCAGCACCCAGGAGACTGAGGTGGAAATGTTCCCCGGAAATTCAAGGCCTCTTAGCCACCTCGGCAGAAAAACTTCAACAAATAGTAAAGAATCTCGACTTCATCGTTTATAAATTTGACGACTATGGGAAAACATTCATTAAGCAGCAGAAGTGCAGCCCCGATGCCTTTATTCAGGTGGCCCTCCAGCTGGCCTTCTATAGGCTCCACAGGAGACTCGTGCCCACCTACGAGAGCGCGTCCATCCGTCGGTTCCACGAGGGACGGGTGGACAACATTCGATCAGCCACTCTGGAGGTGCTGCGTTTTGTGAAAACCATCACTGACCACACGGCCACCGTGCCGGATTCAGAGAAGCTACTGCTCCTGAAGGATGCCATCCGAGCCCAGACCGAGTACACAGTCATGGCCATAACAGGGATGGCCATTGACAACCACCTGCTGGGGCTGCGGGAGCTGGCTCGGGAAGTGTGCAAGGAACTGCCCGAGATGTTCACGGATGAAACATACCTGATGAGCAACCGGTTTGTCCTCTCCACCAGCCAGGTGCCCACCACCATGGAGATGTTTTGCTGCTATGGTCCTGTGGTACCCAATGGCTATGGCGCCTGCTACAACTCCCAGCCAGAGAGCATCCTTTTCTGCATCTCCAGCTTCCATGGCTGCAAAGAGACCTCTTCAACCAAGTTTGCAAAAGCTGTGGAAGAAAGCCTCATTGAAATGAGAGGCCTCTGCAGTCGGCCACCGTGTGCCACGGGCAAGCCACTGGTGAAAAAGGAAAAAGTAACAAGGCCCAGCCAGGGGCACCAACCTTGA

Related Sequences

bmy_04277T0 SequenceType object (3)

Length: 561 aa      View alignments
>bmy_04277T0
MVSHLPFSPQDMAQNPEVDQMRQESPRGHVEGFARGGRKGIVGTADSCHSRTSVDPSHEPGEITLARTNELAYVPDVACRCEWRVPLDGGIGAPSLAQNWLQLKGRTLAGTLRVSWSLGLAQKLRTVRLTSRPTPWVVGDSGLAQDLGVHTCVRLLRVGLCRGDPRPGAGQVLSKAVLACPADSTNRDSLDMIERCICLVCLDAPGGMELSDTNRALQLLHGGGCSKNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMVKTSRKMVRADSVSELPAPRRLRWKCSPEIQGLLATSAEKLQQIVKNLDFIVYKFDDYGKTFIKQQKCSPDAFIQVALQLAFYRLHRRLVPTYESASIRRFHEGRVDNIRSATLEVLRFVKTITDHTATVPDSEKLLLLKDAIRAQTEYTVMAITGMAIDNHLLGLRELAREVCKELPEMFTDETYLMSNRFVLSTSQVPTTMEMFCCYGPVVPNGYGACYNSQPESILFCISSFHGCKETSSTKFAKAVEESLIEMRGLCSRPPCATGKPLVKKEKVTRPSQGHQP*