Part of scaffold_136 (Scaffold)

For more information consult the page for scaffold_136 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NEUROD1 ENSTTRG00000016757 (Bottlenosed dolphin)

Gene Details

neuronal differentiation 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015887, Bottlenosed dolphin)

Protein Percentage 99.44%
cDNA percentage 98.69%
Ka/Ks Ratio 0.04036 (Ka = 0.0024, Ks = 0.0585)

BT.104022 ENSBTAG00000001755 (Cow)

Gene Details

neurogenic differentiation factor 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002301, Cow)

Protein Percentage 98.6%
cDNA percentage 95.97%
Ka/Ks Ratio 0.03104 (Ka = 0.006, Ks = 0.1928)

NEUROD1  (Minke Whale)

Gene Details

neuronal differentiation 1

External Links

Gene match (Identifier: BACU014056, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.81%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0065)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1461 bp    Location:1147441..1139973   Strand:-
>bmy_04297
ATGAAAGCGGCTTTTGTTGCCCGCGCGTGCGGTTCGCGTGCCGCGCAGCAGCCTGCGGCGCCCAGTGGGGACCGGAGCTGGAGAAGGTGTACCGCTCAAGGGCGGGTGTCGCGAACCGGGGAAGTTTGCGCTTCCGGGGGTGGGGGAGAATCTCCTAGGCCCCCCCAGGCCTTCGGGGCAGCTGGAACCCTCTTCTACCCTGCCCCCAACATCTCCTCTGAAGCTCCCCTAAGACTGAGAAATGAGAGCCAGGGCACAAGTTCTACGTCCCCGTGGGCACGGTCCGCGGAGTCTCTAACTGGCGACAGATGGGCCACTTTCTTCTGGCCACAAAGGGGCCGGAATGGAGCGCTCCGCGGCATACAAATGGGCAAGTCACGAAAGCTAAACATGACCAAATCGTACAGCGAGAGTGGGCTGATGGGAGAGCCTCAGCCGCAGGGTCCTCCGAGCTGGACAGACGAGTGTCTTAGTTCTCAGGACGAGGAGCACGAGACAGACAAAAAGGAGGACGACCTCGAAGCCATGAACGCGGAAGAGGACTCGCTGAGGAACGGGGGAGAGGAGGAGGAAGAAGAGGAGGACCTGGAAGAGGAGGAAGAAGAGGAAGAGGAGGACGATGATCAAAAGCCTAAGAGACGCGGCCCCAAAAAGAAGAAGATGACCAAGGCGCGCCTGGAGCGTTTTAAGCTGAGACGCATGAAAGCTAACGCCCGGGAGCGGAACCGCATGCATGGGCTGAACGCGGCGCTGGACAACCTGCGCAAGGTAGTGCCCTGCTACTCCAAGACACAGAAGCTGTCCAAAATCGAGACACTGCGCTTGGCCAAAAACTACATCTGGGCTCTGTCGGAGATTCTGCGTTCCGGCAAAAGCCCTGACCTGGTCTCCTTTGTACAGACGCTCTGCAAGGGCTTATCCCAGCCCACCACCAACCTGGTTGCCGGCTGCCTGCAGCTCAATCCTCGGACTTTCCTGCCTGAGCAGAACCAGGACATGCCTCCGCACCTGCCGACTGCCAGCGCTTCTTTCCCTGTGCACCCCTACGCCTACCAGTCTCCGGGGCTGCCCAGCCCGCCCTACGGCACCATGGACAGCTCCCATGTCTTCCACGTCAAGCCGCCGCCGCATGCCTACAGCGCCGCGCTCGAGCCCTTCTTTGAGAGCCCTCTGACTGATTGCACCAGCCCTTCCTTTGACGGACCCCTCAGCCCGCCGCTCAGCATCAATGGCAACTTCTCTTTCAAACACGAACCGTCCGCCGAGTTTGAGAAAAATTATGCCTTTACCATGCACTATCCTGCAGCGACCCTGGCAGGGGCCCAAAGCCACGGATCAATCTTCTCGGGCGCCGCTGCCCCTCGCTGTGAGATCCCTATAGACAATATTATGTCCTTCGATAGCCATTCACATCATGAGCGAGTCATGAGTGCCCAGCTCAATGCCATCTTTCACGATTAG

Related Sequences

bmy_04297T0 Protein

Length: 487 aa      View alignments
>bmy_04297T0
MKAAFVARACGSRAAQQPAAPSGDRSWRRCTAQGRVSRTGEVCASGGGGESPRPPQAFGAAGTLFYPAPNISSEAPLRLRNESQGTSSTSPWARSAESLTGDRWATFFWPQRGRNGALRGIQMGKSRKLNMTKSYSESGLMGEPQPQGPPSWTDECLSSQDEEHETDKKEDDLEAMNAEEDSLRNGGEEEEEEEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLERFKLRRMKANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPTTNLVAGCLQLNPRTFLPEQNQDMPPHLPTASASFPVHPYAYQSPGLPSPPYGTMDSSHVFHVKPPPHAYSAALEPFFESPLTDCTSPSFDGPLSPPLSINGNFSFKHEPSAEFEKNYAFTMHYPAATLAGAQSHGSIFSGAAAPRCEIPIDNIMSFDSHSHHERVMSAQLNAIFHD*