Sequence details bmy_04301 (Coding sequence)

Part of scaffold_136 (Scaffold)

For more information consult the page for scaffold_136 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PDE1A ENSBTAG00000012100 (Cow)

Gene Details

Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016060, Cow)

Protein Percentage 91.44%
cDNA percentage 91.63%
Ka/Ks Ratio 0.37482 (Ka = 0.0658, Ks = 0.1755)

Additional orthologs identified in other species via the OPTIC pipeline.

PDE1A (Human)   Pde1a (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1650 bp    Location:1719810..1622274   Strand:-
Raw sequence 
>bmy_04301
ATGTTCATTGTTTATGATAAATCTCTTTTTATTTTTCTTTCTTTTTGGCTAACTTTTGGAAATAGACTAAGATGCTTAGTGAAGCAGCTGGAAAAAGGTGATGTTAACATCGTAGACTTAAAGAAGAATATTGAATATGCAGCATCTGTGCTGGAAGCAGTTTATATCGATGAAACAAGTTTAACCACTATAAATTTTTGTAGAAGACTGCTGGATACTGATGATGAGCTCAGTGACATTCAGTCGGATTCRGTCCCATCGGAAGTCCGGGACTGGTTGGCTTCCACCTTTACACGGAAAATGGGGATGATGAAAAAGAAATCTGAGGAAAAACCAAGATTTCGGAGCATTGTGCATGCTGTTCAAGCTGGAATTTTTGTGGAAAGAATGTACAGAAAATCCTATCACATGGTTGGGTTGGCATATCCAGAAGCTGTCATAGTAACRTTAAAGGATGTTGATAAATGGTCTTTTGATGTATTTGCCTTGAATGAAGCAAGTGGAGAACATAGTCTGAAGTTTATGATTTATGAACTATTTACCAGATATGATCTTATCAACCGTTTCAAGATTCCTGTTTCTTGCCTAATTGCCTTTGCAGAAGCTTTAGAAGTTGGTTACAGCAAGTACAAAAATCCGTATCACAATTTGATTCATGCAGCTGATGTCACTCAAACTGTGCATTACATAATGCTTCATACAGGTATCATGCACTGGCTCACTGAACTGGAAATTTTAGCAATGGTCTTTGCCGCTGCCATTCATGATTATGAGCATACGGGAACTACAAACAATTTTCATATTCAGACAAGGTCAGATGTTGCCATTTTGTATAATGATCGCTCCGTCCTTGAAAATCACCATGTGAGTGCAGCTTATCGACTTATGCAAGAAGAAGAAATGAATGTCCTGGTAAATTTATCCAAAGATGACTGGAGGGATCTTCGGAACCTAGTGATTGAAATGGTTTTGTCTACAGACATGTCGGGTCACTTCCAGCAAATTAAAAATATAAGAAACAGTTTGCAGCAGCCTGAAGGGCTTGACAAAGCCAAAACCATGTCCCTGATTCTCCATGCAGCAGACATCAGTCACCCAGCCAAATCCTGGCAGCTGCACCACCGATGGACCATGGCCCTGATGGAGGAGTTCTTCCTACAGGGAGATAAAGAAGCTGAATTAGGGCTTCCATTTTCCCCACTTTGTGATCGGAAGTCAACGATGGTGGCCCAGTCCCAAATAGGTTTCATTGATTTCATAGTAGAGCCAACATTTTCTCTTCTGACAGACTCAACAGAGAAAATTATTATTCCTCTTATAGAGGAAGACTCAAAAACCAAAACTCCTTCCTATGGAGCAAGCAGACGATCAAATATGAAAGGCACCGTGAATGATGGAACCTATTCCCCAGACTACTCCCTTGCAAGCGTGGACCTGAAGAGCTTCAAAAACAACCTGGTGGACATCATCCAGCAGAACAAAGAGAGGTGGAAAGAGTTAGCTGCTCAAGCTAGCAATCTACATTATATTATTAGTGCAGTAGAGCAGAAATATGCATTTGATGGAATGGAACATTTGGAAGATCAGAATTATAAAGTTCTAAGAGGTGGCATCCACCAAAGTCGCTTAACCCTAGAAGAGCTTAAGTGA

Related Sequences

bmy_04301T0 Protein

Length: 550 aa      
>bmy_04301T0
MFIVYDKSLFIFLSFWLTFGNRLRCLVKQLEKGDVNIVDLKKNIEYAASVLEAVYIDETSLTTINFCRRLLDTDDELSDIQSDSVPSEVRDWLASTFTRKMGMMKKKSEEKPRFRSIVHAVQAGIFVERMYRKSYHMVGLAYPEAVIVTLKDVDKWSFDVFALNEASGEHSLKFMIYELFTRYDLINRFKIPVSCLIAFAEALEVGYSKYKNPYHNLIHAADVTQTVHYIMLHTGIMHWLTELEILAMVFAAAIHDYEHTGTTNNFHIQTRSDVAILYNDRSVLENHHVSAAYRLMQEEEMNVLVNLSKDDWRDLRNLVIEMVLSTDMSGHFQQIKNIRNSLQQPEGLDKAKTMSLILHAADISHPAKSWQLHHRWTMALMEEFFLQGDKEAELGLPFSPLCDRKSTMVAQSQIGFIDFIVEPTFSLLTDSTEKIIIPLIEEDSKTKTPSYGASRRSNMKGTVNDGTYSPDYSLASVDLKSFKNNLVDIIQQNKERWKELAAQASNLHYIISAVEQKYAFDGMEHLEDQNYKVLRGGIHQSRLTLEELK*