Part of scaffold_141 (Scaffold)

For more information consult the page for scaffold_141 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PHTF2 ENSTTRG00000012686 (Bottlenosed dolphin)

Gene Details

putative homeodomain transcription factor 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012041, Bottlenosed dolphin)

Protein Percentage 94.71%
cDNA percentage 95.33%
Ka/Ks Ratio 0.36872 (Ka = 0.0173, Ks = 0.0469)

PHTF2 ENSBTAG00000005102 (Cow)

Gene Details

putative homeodomain transcription factor 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006730, Cow)

Protein Percentage 97.29%
cDNA percentage 96.48%
Ka/Ks Ratio 0.14425 (Ka = 0.0153, Ks = 0.1061)

PHTF2  (Minke Whale)

Gene Details

putative homeodomain transcription factor 2

External Links

Gene match (Identifier: BACU012290, Minke Whale)

Protein Percentage 92.88%
cDNA percentage 94.5%
Ka/Ks Ratio 0.56484 (Ka = 0.0495, Ks = 0.0876)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2277 bp    Location:1115436..976492   Strand:-
>bmy_04347
ATGACTTGGACGCAAATAGAGTTGCTGAAAAGGTCTGCATTTGCTAAGGCAAAACCTGAAAGTCCATGGACTTCTCTGACTAGAAAGGGAATTGTTCGAGTTGTATTTTTTCCCTTTTTCTTCCGGTGGTGGTTACAAGTAACATCAAAAGTCATCTTTTTCTGGCTTCTAGTCCTTTATCTTCTTCAAGTTGCCGCAATAGTATTATTCTGTTCCGCTTCTAGCCCACATAGCATACCTCTGACGGAAGTGATTGGGCCGATATGGCTGATGCTGCTCCTGGGAACTGTGCACTGCCAGATTGTTTCAACGAGAACACCCAAACCTCCGCTAAGTACAGGAGGTAAAAGAAGAAGGAAATTAAGAAAAGCAGCCCATTTGGAAGTACATAGGGAAGGAGATGGTTCTAGTACCACAGATAACACACAGGAGGGAGCAGTTCAGAGCCACGGTACAAGCACCGCTTACAGCGTTGGCGCTGTCTTCAGAGATCTCTGGCATGCTGCTTTCTTTTTATCAGGGTTTGTATTTATTCAAGACTTCATATGGCATAGAAATGCACTATCCCTTTTCTGGCACTCGAGTCTCAGATCAAAGAAAGCAAAGAATTCAATTGATAAATCAACTGAGACTGACAATGGCTATGTATCCCTTGATGGGAAAAAGACTGTTAAAAGCAGCGAAGATGGAGTACAAAGCCATGAACCTCAGTGTGAAACTCTTCGACCAGAAGAGGCAACCTGGAACACAGGAACACTGAGGAACATTCCCAGCAAAGATACCCAAAGGACAGTAACAAATGTCTCTGATGAAGTCTCCAGTGAAGAAGGTCCAGAAACAGGATACCCATTGCGCCGTCATGCAGACAGGACTTCTGAGAGCATTCTTCGGAATAGAAAGTCACACCATTATAAGAAACATTACCCTAATGAGGATGCCCCTAAATCGGGTACTAGTTGCAGCTCTCGCTGTTCAAGTTCCAGACAGGATTCTGAGAGCACAAGGCCAGAATCTGAAACAGAAGATGTATTATGGGAAGACTTGTTACATTGTGCAGAATGCCGATCATCTTGTACCAGTGAGACAGATGTGGAAAATCCTCAAATTAATCCATGTGTGAAAAAAGAATATAGAGACGACCCTTTTCATCAGAGTCATTTGCCCTGGCTCCATAGTTCCCACCCGGGATTAGAAAAAATAAGCGCTATCGTATGGGAAGGCAATGACTGCAAGAAAGCAGACATGTCTGTACTTGAAATCAGTGGAATGATAATGAACAGAGTAAACAGCCATATACCAGGAATAGGATACCAGATTTTTGGAAACGCAATCTCTCTAATCCTGGGTTTAACTCCATTTGTTTTCCGACTCTCCCAAGCTACAGACTTGGATCAACTCACAGCACATTCTGCTTCAGAACTTTATGTGATTGCATTTGGTTCTAATGAAGATGTCATAGTTCTTTCTATGGTTATAATAAGTTTTGTGGTTCGTGTGTCTCTTGTGTGGATTTTCTTTTTTTTGCTCTGTGTAGCAGAAAGAACTTATAAACAGCGATTACTTTTTGCAAAACTCTTTGGACATTTAACATCGGCAAGGAGGGCTCGAAAATCTGAGGTTCCCCATTTCCGATTGAAGAAAGTACAGAATATAAAAATGTGGCTCTCTCTCCGGTCCTATCTTAAGCGTCGAGGTCCTCAGCGATCAGTTGATGTCATAGTTTCATCTGCTTTCTTGTTAACTATCTCAGTGGTATTTATCTGTTGTGCCCAGTTGCTTCATGTACATGAGATCTTCCTTGATTGTCACTACAATTGGGAACTGGTAATCTGGTGCATCTCGTTAACACTTTTTCTCCTAAGATTTGTTACCCTTGGATCAGAAACAAGTAAAAAATATAGCAATACCTCAATATTACTTACTGAACAGATAAACCTCTACTTGAAAATGGAGAAGAAACCTAACAAAAAGGAGGAACTGACACTAGTGAATAATGTTTTAAAACTGGCTACTAAACTGCTAAAGGAATTGGACAGTCCCTTTAGATTATATGGGCTTACAATGAATCCACTGCTTTATAACATCACCCAGGTTGTCATCCTGTCAGCTGTTTCTGGTGTTATCAGTGACTTACTTGGATTTAATTTAAAGATTCTCATTAAAGTTCTCCATGGTCTCCACGACTTCCTGCTGTCTGCCACTAAGAAGTCTGACTCCCTGATCTCTGTCCAGGGCAGGTCTTTACTCAGCTCAGGAATTCCAGAGATAAGGGCCTAA

Related Sequences

bmy_04347T0 Protein

Length: 759 aa      View alignments
>bmy_04347T0
MTWTQIELLKRSAFAKAKPESPWTSLTRKGIVRVVFFPFFFRWWLQVTSKVIFFWLLVLYLLQVAAIVLFCSASSPHSIPLTEVIGPIWLMLLLGTVHCQIVSTRTPKPPLSTGGKRRRKLRKAAHLEVHREGDGSSTTDNTQEGAVQSHGTSTAYSVGAVFRDLWHAAFFLSGFVFIQDFIWHRNALSLFWHSSLRSKKAKNSIDKSTETDNGYVSLDGKKTVKSSEDGVQSHEPQCETLRPEEATWNTGTLRNIPSKDTQRTVTNVSDEVSSEEGPETGYPLRRHADRTSESILRNRKSHHYKKHYPNEDAPKSGTSCSSRCSSSRQDSESTRPESETEDVLWEDLLHCAECRSSCTSETDVENPQINPCVKKEYRDDPFHQSHLPWLHSSHPGLEKISAIVWEGNDCKKADMSVLEISGMIMNRVNSHIPGIGYQIFGNAISLILGLTPFVFRLSQATDLDQLTAHSASELYVIAFGSNEDVIVLSMVIISFVVRVSLVWIFFFLLCVAERTYKQRLLFAKLFGHLTSARRARKSEVPHFRLKKVQNIKMWLSLRSYLKRRGPQRSVDVIVSSAFLLTISVVFICCAQLLHVHEIFLDCHYNWELVIWCISLTLFLLRFVTLGSETSKKYSNTSILLTEQINLYLKMEKKPNKKEELTLVNNVLKLATKLLKELDSPFRLYGLTMNPLLYNITQVVILSAVSGVISDLLGFNLKILIKVLHGLHDFLLSATKKSDSLISVQGRSLLSSGIPEIRA*