Part of scaffold_141 (Scaffold)

For more information consult the page for scaffold_141 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTPN12 ENSTTRG00000000779 (Bottlenosed dolphin)

Gene Details

protein tyrosine phosphatase, non-receptor type 12

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000733, Bottlenosed dolphin)

Protein Percentage 97.57%
cDNA percentage 98.71%
Ka/Ks Ratio 0.50069 (Ka = 0.0107, Ks = 0.0214)

PTPN12 ENSBTAG00000003825 (Cow)

Gene Details

tyrosine-protein phosphatase non-receptor type 12

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004985, Cow)

Protein Percentage 89.81%
cDNA percentage 93.53%
Ka/Ks Ratio 0.33311 (Ka = 0.0481, Ks = 0.1444)

PTPN12  (Minke Whale)

Gene Details

protein tyrosine phosphatase, non-receptor type 12

External Links

Gene match (Identifier: BACU012287, Minke Whale)

Protein Percentage 98.3%
cDNA percentage 99.11%
Ka/Ks Ratio 0.53554 (Ka = 0.0075, Ks = 0.014)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1239 bp    Location:1251174..1239669   Strand:-
>bmy_04353
TGCCTTGTAGAAGGGGATGCTAAGGAAGAAATACTGCAGCCTCCAGAACCTCACCCAGTGCCACCCATCTTGACACCTTCTCCCCCTTCAGCTTTTCCAACAGTCACTACTGTGTGGCAGGACAATGACAGATACCATCCAAAGCCAGTGTTGCACGTGGTTTCATCAGAACAACATTCAACAGACCTCAACAGAAACTATAATAAATCAACAGAACTTACAGGGAAAAATGAATCAACTGTTGAACAAATAGATAAAAAATTGGAGCGAAATTTAAGTTTTGAGATTAAGAAGGTCCCTCTTCAAGAAGGACCAAAAAGTTTTGAAGGGAACACACTCTTGAATAGGGGACATGCAATTAAAATTAAATCGGCTTTGGCTTCACCATGTACAATTGATAAAATCTTTAAATCACAGGAATTGAATTCAAGAGATCTAAAAATTGATGATATTTCCCAGAATTCCTGTGTGGACTGCAATGCAACACAGTCAAATAAAGCTCCAGTTATCCTACCAGAAGAATCACAGAAGAATTCAGACACACCTCCAAGGCCAGACCGCTTACCTCTTGATGAGAAAGGACATGCACCGTGGTCATTTCATGGACCTGAGAATCCTCTACCCATGCCTGATTCCTCTGAAGGCAAATCCTCAGATACCCACTGTCAAACAATGAAAACTGGGAGTTCAACACCAAGCCCCACGACACAACTTGCAACCCATGATCTCACAGATCATCACAACAGTTCCCCTCTATTCAGAGCACCCCTCAGTTTTACTAATCCTCTTCACTCTGATGACTCGGACTCTGATGAAAGGAACTCTGATGGTGCTGTGACCAAGAATAAAACCAGTATTTCAACAGCACGTGCGACTGTTTCTGCTGCCGCTAATGTTGATGTTAGTGAAGATTCGCCTCCTCCCCTACCTGAAAGAACTCCTGAGTCTTTTGTATTGGCCAGTGAACATAATACACCTGTGAGATCTGAGTGGAGTGAACTTCAAAATCAGGAACAGTGTGAACAAAGAAAACCTGAAGGCTTGATAACCTCTGGAAGTGAAACATGTGACCATCCAGCACGAGGTATTCATACAGAGACTTGTACAGAATGTCCACCTACTTTCAGTAACAAGAAAGATCAAATATCAGAAAGTCCAACAGAAGCCACAGAGATTGGTTTTGGTAATCGCTGTGGAAAACCCAAAGGACCAAGAGATCCACCTTCAGAATGGACATGA

Related Sequences

bmy_04353T0 Protein

Length: 413 aa      View alignments
>bmy_04353T0
CLVEGDAKEEILQPPEPHPVPPILTPSPPSAFPTVTTVWQDNDRYHPKPVLHVVSSEQHSTDLNRNYNKSTELTGKNESTVEQIDKKLERNLSFEIKKVPLQEGPKSFEGNTLLNRGHAIKIKSALASPCTIDKIFKSQELNSRDLKIDDISQNSCVDCNATQSNKAPVILPEESQKNSDTPPRPDRLPLDEKGHAPWSFHGPENPLPMPDSSEGKSSDTHCQTMKTGSSTPSPTTQLATHDLTDHHNSSPLFRAPLSFTNPLHSDDSDSDERNSDGAVTKNKTSISTARATVSAAANVDVSEDSPPPLPERTPESFVLASEHNTPVRSEWSELQNQEQCEQRKPEGLITSGSETCDHPARGIHTETCTECPPTFSNKKDQISESPTEATEIGFGNRCGKPKGPRDPPSEWT*