Sequence details bmy_04362 (Coding sequence)

Part of scaffold_141 (Scaffold)

For more information consult the page for scaffold_141 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRRC17 ENSBTAG00000024379 (Cow)

Gene Details

leucine-rich repeat-containing protein 17 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000033684, Cow)

Protein Percentage 94.09%
cDNA percentage 93.64%
Ka/Ks Ratio 0.17937 (Ka = 0.0302, Ks = 0.1683)

LRRC17  (Minke Whale)

Gene Details

leucine rich repeat containing 17

External Links

Gene match (Identifier: BACU012281, Minke Whale)

Protein Percentage 98.85%
cDNA percentage 98.78%
Ka/Ks Ratio 0.11604 (Ka = 0.0049, Ks = 0.0421)

Additional orthologs identified in other species via the OPTIC pipeline.

LRRC17 (Human)   Lrrc17 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1323 bp    Location:1839999..1853689   Strand:+
Raw sequence 
>bmy_04362
ATGCGCGTGGTTACCATCTTAATCCTGCTCTTCTTTTGTAAAGCCGCTGAGCGCAAAGGAAGCCCTGGGGGTGCGAGAAACCGAGTGAATCACAGCCGGGCTGGTGGGAGCCGGAAAGGCTCCAGCCTGGTCAAACGCTACGCTCCAGGCCTCCCCTGTGAAGTGTACACATATCTTCATGAGAAATACTTAGATTGTCAAGAGAGAAAACTAGTTTATGTGCTGCCCGGCTGGCCTCAGGATTTACTGCACATGCTATTAGCAAGAAACAAAATCCGCATACTGAAGAACAACATGTTTTCCAAGTTTAAAAAGCTGAAAAGCTTGGATCTGCAACAGAATGAGATCTCCAAAATTGAGAGTGAGGCTTTCTTTGGTTTAAATAAACTTACCACTCTCTTACTGCAGCACAACCAGATCAAAGTCTTGACAGAGGAAGTGTTCATTTACACACCTCTCCTGAGCTACCTGCGTCTTTATGACAATCCCTGGCATTGTACTTGTGAGATGGAAACGCTTATTTCAATGTTGCAGATTCCAAGGAACCGGAATTTGGGGAACTACGCCAAGTGTGAAAGCCCACAAGGACTAAAAAATAAAAAACTGAGGCAGATAAAATCTGAACAGTTATGTAATGAAGAAGAAAAGGAACAACTGGATCCGAAACCCCAAGTGTCAGGGAAACCCCCAGTCATCAAGCCCGAGGTGGACTCTTCTCTTTGCCACAACTACGTGTTTCCCATACGAACACTGGACTGCAAAAGAAAAGAGTTGAAGAAAGTTCCAAACAACATCCCTCCAGACATTGTTAAACTTGACTTGTCACACAACAAAATCAACCAACTTCGACCCAAGGAGTTTGAAGATGCTCATGAGCTAAAGAAATTAAACCTCAGCAGCAATGGCATTCAATTCATAGATCCCGCTGCTTTTTTAGGACTCACACATTTAGAAGAGTTAGATTTATCAAACAACAGTCTGCAAAACTTTGACTATGGAGTATTAGAAGACTTGTATTTTTTGAAACTCTTGTGGCTCAGAGATAACCCTTGGAGATGTGACTACAACATCCACTACCTCTACTACTGGTTAATGCATCACTACAACGTGCACTATAATGGCCTGGAGTGTAAAATGCCCAAAGAATACAAAGGGTGGTTTGTGGGAAAATATGTGCGGAGTTACTTTGAAGAATGCCCCAAAGACAAATTACCAGCATACCCTGAAACATTTGACCAGGATACCGAAGATGATGAATGGGAAAAAATACATAAGGATCACACAGCAAAGAAACAAAGTGTAAGAATCACTATTGTGGGATAA

Related Sequences

bmy_04362T0 Protein

Length: 441 aa      View alignments
>bmy_04362T0
MRVVTILILLFFCKAAERKGSPGGARNRVNHSRAGGSRKGSSLVKRYAPGLPCEVYTYLHEKYLDCQERKLVYVLPGWPQDLLHMLLARNKIRILKNNMFSKFKKLKSLDLQQNEISKIESEAFFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYDNPWHCTCEMETLISMLQIPRNRNLGNYAKCESPQGLKNKKLRQIKSEQLCNEEEKEQLDPKPQVSGKPPVIKPEVDSSLCHNYVFPIRTLDCKRKELKKVPNNIPPDIVKLDLSHNKINQLRPKEFEDAHELKKLNLSSNGIQFIDPAAFLGLTHLEELDLSNNSLQNFDYGVLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLMHHYNVHYNGLECKMPKEYKGWFVGKYVRSYFEECPKDKLPAYPETFDQDTEDDEWEKIHKDHTAKKQSVRITIVG*