Part of scaffold_144 (Scaffold)

For more information consult the page for scaffold_144 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PDC ENSTTRG00000012214 (Bottlenosed dolphin)

Gene Details

phosducin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011582, Bottlenosed dolphin)

Protein Percentage 95.37%
cDNA percentage 97.22%
Ka/Ks Ratio 0.59715 (Ka = 0.0186, Ks = 0.0312)

PDC ENSBTAG00000004176 (Cow)

Gene Details

phosducin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005468, Cow)

Protein Percentage 91.67%
cDNA percentage 92.9%
Ka/Ks Ratio 0.2021 (Ka = 0.0368, Ks = 0.1821)

PDC  (Minke Whale)

Gene Details

phosducin

External Links

Gene match (Identifier: BACU001534, Minke Whale)

Protein Percentage 78.24%
cDNA percentage 83.94%
Ka/Ks Ratio 0.71872 (Ka = 0.1666, Ks = 0.2319)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 651 bp    Location:93371..99083   Strand:+
>bmy_04376
ATGGAAGGGGCCAAAAGGCAAAGTTTGGAGGAAGACTCTGAAGGACAGGCCACACACACAGGACCCAAAGGAGTAATAAATGATTGGAGAAAGTTTAAATTGGAGAGTGAAGATAGTAATTCATTCCCACCCAGCAAGAAGGAGATTCTCAGACAAATGTCTTCTCCTCAGAGTAGAGATGACAAAGACTCAAAAGAAAGATTCAGCAGAAAGATGCACCAGAAGCTGAGTTTTGGGCCTAGATATGGGTTTGTCTATGAGCTGGAATCTGGGGAGCAATTCCTGGAAACCATTGAAAAGGAGCAGAAAATAATCACAATCATTGTTCACATTTATGAAGATGGTATTAAGGGTTGTGATGCTCTAAACAGTAGCTTAATATGCCTTGCAGCCGAATACCCTACGGTCAAGTTTTGTAAAATAAAAGCTTCTAATACAGGCGCTGGGGACCGCTTTTCCTCAGATGTACTCCCCACACTGCTCGTCTACAAAGGTGGGGAACTCATAAGCAATTTCATTAGTGTTGCTGAACAGTTTGCCAAAGAATTTTTTACTGGGGATGTGGAATCYTTCCTGAATGAATATGGGTTATTACCTGAAACAGAAATGCATGTCMTGGAGCAGAGCAACRTGGAAGAAGATATGGAATAA

Related Sequences

bmy_04376T0 Protein

Length: 217 aa      View alignments
>bmy_04376T0
MEGAKRQSLEEDSEGQATHTGPKGVINDWRKFKLESEDSNSFPPSKKEILRQMSSPQSRDDKDSKERFSRKMHQKLSFGPRYGFVYELESGEQFLETIEKEQKIITIIVHIYEDGIKGCDALNSSLICLAAEYPTVKFCKIKASNTGAGDRFSSDVLPTLLVYKGGELISNFISVAEQFAKEFFTGDVESFLNEYGLLPETEMHVXEQSNXEEDME*