Part of scaffold_144 (Scaffold)

For more information consult the page for scaffold_144 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TPR ENSTTRG00000012196 (Bottlenosed dolphin)

Gene Details

translocated promoter region, nuclear basket protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011574, Bottlenosed dolphin)

Protein Percentage 91.75%
cDNA percentage 91.91%
Ka/Ks Ratio 0.21358 (Ka = 0.0077, Ks = 0.0362)

TPR ENSBTAG00000011943 (Cow)

Gene Details

nucleoprotein TPR

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015848, Cow)

Protein Percentage 96.57%
cDNA percentage 95.2%
Ka/Ks Ratio 0.10636 (Ka = 0.0164, Ks = 0.1542)

TPR  (Minke Whale)

Gene Details

translocated promoter region, nuclear basket protein

External Links

Gene match (Identifier: BACU001533, Minke Whale)

Protein Percentage 99.14%
cDNA percentage 99.13%
Ka/Ks Ratio 0.15705 (Ka = 0.0039, Ks = 0.0246)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 7227 bp    Location:177017..246822   Strand:+
>bmy_04378
ATGCCCTCTAGCGGCCCAGTGTCTAAAAGCCGCCAAAGAGGACGACCCATGGCATCCCGGAGCTATGACGGTAAGGTCGCCCTCCTCTTCAGGGAGGAACGTAGGTTAACGGGTATTATGTGGCGCCACCTCGCGGATAAGGTGCACAGCTTCCGGTGGTTGCGCGCGCACTGCGGACGCGGGCGCTGCGGCGCGTCCGGTGCAGCGGTTAACGCGGGACTCGATTTCCCAGGGTCCCGCCGTGGGAGTCTCCGTCGGGCGGGCGCGCGCGAGCCACCGAGCGAGGTGGCGGAGGCAGCAGCCCAGGCTTCTGGGTCCTCTTGGTCTTCGCCTTTCTTCTCCGTTTCTGCTCCGTCGGCCGCTGCCGCCGCGGTCCCCGGCCCGATCGACATGGCGGCGGTGTTGCAGCAAGTCCTGGAGCGCACGGAATTGAACAAGCTGCCTAAGTCGGTCCAGAACAAACTTGAGAAGTTCCTTGCTGACCAGCAGTCCGAGATCGATGGCCTCAAGGGGCGGCACGAGAAATTTAAGGTGGAGAGCGAACAACAGTACTTTGAGATAGAGAAGAGGCTGTCCCACAGTCAGGAGAGACTTGTGAATGAAACCCGAGAGTGCCAAAGCTTGCGGCTTGAGCTGGAGAAGCTCAACAGTCAACTGAAGGCGCTAACTGAGAAAAACAAAGAACTTGAAGTGGCTCAGGATCGCAATATTGCCATTCAGAGCCAGTTTACAAGGACAAAGGAAGAATTAGAAGCTGAGAAAAGAGACTTAATTAGAACCAATGAGAGACTATCTCAAGAACTTGAATATTTAACAGAGGATGTTAAACGTCTAAATGAAAAACTTAAAGAAAGCAATGCAACAAAGGGTGAGCTTCAGTTAAAATTGGATGAACTTCAAGCTTCTGAGGTTTCTGTTAAGTATCGAGAAAAACGCTTGGAGCAAGAAAAAGAGTTGTTACATAATCAGAATACTTGGCTGAATACAGAGTTGAAGACCAAAACTGATGAACTTCTGGCTCTCGGCAGAGATAAAGGAAATGAAATTCTCGAGCTTAAATGTAATCTTGAAAACAAAAAAGAGGAGGTTTCTAGAATGGAAGAACAGATGAATGGCTTGAAAACATCAAATGAGAATCTTCAAAAGCATGTAGAGGATCTGTTGACCAAACTGAAAGAGGCCAAGGAACAGCAGGCCAGTATGGAAGAGAAATTCCACAATGAATTAAATGCTCACATAAAACTCTCTAACCTTTACAAGAGTGCTGCTGATGATTCAGAGGCAAAGAGCAATGAACTGACCCGAGCAGTGGATGAATTACACAAACTTTTGAAGGAAGCTGGAGAAGCCAATAAAGCAATACAAGATCATCTTCTAGAAGYAGAGGAATCTAAAGATCAAATGGAAAAAGAAATGCTYGAGAAAATAGGGAAATTAGAGAAGGAATTAGAGAATGCAAATGACCTGCTTTCTGCCACAAAACGTAAAGGGGCCATCTTGTCTGAAGAAGAGCTTGCAGCCATGTCTCCTACTGCAGCAGCCGTAGCTAAGATAGTGAAACCTGGCATGAAGCTAACTGAGCTGTATAATGCTTATGTGGAAACTCAGGATCAGCTGCTTTTGGAGAAACTAGAGAACAAAAGAATTAATAAGTATCTAGATGAAATAGTGAAAGAAGTTGAAGCCAAAGCACCAATTTTGAAACGCCAACGTGAGGAGTATGAACGTGCACAGAAAGCTGTGGCAAGTTTATCTGTTAAGCTTGAACAAGCTATGAAGGAGATTCAGCGATTGCAGGAGAACACAGATAAAGCCAATAAACATTCATCTGTGCTTGAAAGAGACAATCAAAGAATGGAAGTACAAATAAAAGATCTTTCACAACAGATTAGAGTGCTTCTGATGGAACTTGAAGAAGCGAGGGGTAACCATGTAATCCGTGATGAGGAAGTAAGCTCTGCTGATATAAGTAGTTCATCTGAAGTAATATCACAGCACCTAGTATCTTACAGAAACATTGAAGAGCTTCAACAGCAAAATCAACGTCTCTTAATTCACCTCAAACTTGAGAGCGCCCTCGCTGAAGTGGAACAACTCCGTGAATCACGGCGACATCAAATGCAGCTTGTCGATTCCATAGTTCGTCAGCGTGATATGTACCGTATTTTGTTGTCACAGACAACAGGAGTTACCATTCCTTTACAAGCTTCAAGCTTAGATGATAGTTCTCTTGTGTCAACTCCAAAACGTTCAAGTACATCACAGGCTGTTTCCACTCCTACTCCAGTACCTGTAATTGAGTCAGCAGAGGCTATAGAAGCCAAGGCTGCCCTTAAACAGTTGCAGGAAATTTTTGAGAACTACAGAAAAGAAAAGGCAGATAATGAAAAAATGCAGAGTGAGCAGCTTGAGAAACTTCAGGAGCAAGTCACAGATTTGCGATCACAAAATACCAAAATTTCTACCCAGCTAGATTTTGCTTCTAAACGTTATGAAATGCTACAAGATAATGTAAGAGCAGAAAATTTGAAAAAGGAAAAGGAAATGCTTAAACTGTCAGAAGTTCGTCTTTCTCAGCAAAGAGAATCTTTGTTGGCTGAACAAAGAGGGCAAAACTTGCTGCTAACTAATCTGCAAACAATTCAGGGAATATTGGAACGATCTGAAACAGAAACCAAACAAAGGCTTAGTAGCCAGATAGAAAAACTGGAACATGAGATATCCCATCTAAAGAAGAAGTTGGAAAATGAGGTGGAACTAAGGCATACACTTACTAGAAATCTAGATGTTCAACTTTTAGATACAAAGAGACAGCTGGATACTGAGACTAATCTTCATGTTAACACAAAAGAACTGTTAAAAAATGCTCAAAAGGAAATTGCTACATTGAAACAGCACCTCAGCAATGTGGAAGTCCAGCTTGCTTCTCAGTCCTCACAGAGAACTGGTAAAGGTCAGCCTAGCAACAAAGAAGATGTGGATGACCTTCTGAGTCAGCTAAGGCAGGCAGAAGAGCAGGTGAATGACTTGAAGGAAAGACTCAAAACAAGCACTAATAATGTGGAACAGTATCGTGCAATGGTTACTAGTTTGGAAGAGTCCCTCAACAAGGAAAAACAGGTGACAGAAGAAGTACATAAGAATATTGAAGTTCGCTTAAAAGAGTCAGCTGAGTTTCAGACACAGCTGGAAAAGAAGTTAATGGAAGTAGAGAAGGAAAAACAGGAACTTCAGGAYGACAAGAGAAAAGCCATAGAGAGCATGGAACAACAGTTATCTGAGTTAAAGAAAACACTCAGTAGTGTTCAGAATGAAGTACAAGAAGCTCTTCAGAGAGCGAGCACAGCTTTGAGTAATGAACAGCAAGCCAGACGGGACTGTCAGGAACAAGCTAAAATAGCTGTGGAAGCTCAGAATAAGTATGAGAGAGAATTGATGCTACATGCTGCTGATGTTGAAGCTCTACAAGCTGCCAAGGAACAGGTTTCCAAAATGATGTCAGTGCGTCAGCACTTGGAAGAAACAGCCCAGAAAGCAGAATCACAGTTGTTGGAGTGTAAAGCATCTTGGGAGGAAAGAGAGAGAATGTTAAAGGATGAAGTTTCCAAGAGTGTGTCTCGCTGTGAAGATCTAGAAAAACAAAACAGATTACTTCATGATCAGATTGAAAAATTAAGTGACAAAGTCATTGCCTCTATGAAGGAAGGTGTACAAGGTCCATTGAATGTATCTCTCAGTGAAGAAGGAAAATCTCAAGAACAAATTTTAGAAATTCTCAGATTTATACGACGAGAAAAAGAAATTGCTGAAACTAGGTTTGAAGTGGCTCAGGTTGAGTGTCTGCGCTATCGGCAAAGGGTTGAACTTTTAGAAAGAGAGCTGCAGGAACTGCAGGATAGTCTAAATGCTGAAAGGGAGAAAGTTCAGGTAACTGCAAAAACAATGGCCCAGCATGAGGAACTGATGAAGAAAACCGAAACAATGAATGTAGTTATGGAGACCAATAAGATTCTGAGGGAAGAAAAGGAAAGGCTAGAACAGGATCTACAACAGATGCAAGCCAAGGTGAGGAAACTGGAGTTAGATATTTTACCCTTACAAGAAGCAAATGCTGAGCTGAGTGAGAAAAGCGGTATGTTGCAAGCAGAGAAGAAGTTATTAGAAGAAGATGTCAAACGTTGGAAAGCACGTAACCAGCATCTAGTGAGTCAACAGAAAGATCCAGATACAGAAGAATATCGAAAGCTCCTTTCTGAAAAGGAAGTTCATGCTAAGCGTATTCAACAATTGACTGAAGAAATTGGAAGGCTTAAAGCTGAAATTGCAAGATCAAATGCATCTTTGACTAACAACCAGAACTTAATCCAGAGTCTAAAGGAAGATTTAAATAAAGTAAGAACTGAAAAGGAAAGCATCCAGAAGGACTTAGATGCCAAAATAATTGATATTCAAGAAAAAGTTAAAACTATTACTCAAGTCAAGAAAATTGGGCGTAGGTACAAGACTCAATATGAAGAACTTAAAGCACAACAAGATAAGGAACAGCATGTCTCAGTCCAGGAAATGCAGGAGCTCAAAGAAACCCTTAATCAAGCTGAAACAAAGTCAAAATCACTCGAGAGTCAGGTGGAGAATCTGCAGAAGGCATTATCTGAAAAAGAGGTGGAAGCAAGAAATCTCCAGGAACAGACTGTGCAGCTTCAATCTGAACTTTCACGACTTCGTCAGGACCTTCAAGATAGAACCACGCAGGAGGAGCAGCTCCGACAGCAGATAACTGAAAAGGAAGAAAAAACAAGAAAGGCTATTGTAGCAGCAAAATCAAAAATTGCACATTTAGCTGGTGTAAAAGATCAGCTAACTAAAGAAAATGAGGAGCTTAAACAAAGGAATGGAGCCTTAGATCAGCAGAAAGATGAACTGGATGTTCGTATGACTGCTCTTAAGTCCCAGTATGAAGGTCGAATTAGTCGCTTGGAAAGAGAACTCAGGGAGCATCAAGAGAGACACCTTGAGCAGAGAGATGAGCCTCAAGAACCTACTAATAAGGTCCCAGAACAGCAGAGACAGATCACGTTGAAAACAGCTCCAACTTCTGGTGAAAGAGGAATTGCCAGCACATCAGACCCACCAACAGCCAATATCAAGCCAACTCCTGTTGTGTCTACTCCAAGTAAAGTGACAGCTGCAGCTATGGCTGGGAATAAGTCAACACCCAGGGCTAGTATCCGCCCAATGGTTACACCTGCAACTGTTACAAATCCTACTACTACCCCAACAGCTACAGTGATGCCCACTACACAAGTGGAATCACAAGAAGCCATGCAATCAGAAGGGCCTGTGGAACATGTTCCAGTTTTCGGAAGCACAAGTGGATCTGTTCGTTCTACTAGTCCTAACGTCCAGCCTTCTATCCCTCAACCCATTTTAACTGTTCAGCAACAAACACAGGCTACAGCTTTTGTGCAACCCACTCAACAGAGTCATCCTCAGATTGAGCCTACAAATCAAGAGCTTTCMCCAAACATAGTGGAGGTGGTTCAGAGTTCACCAGTTGAGCGACCTTCTACTTCCACAGCAGTGTTTGGCACTGTTTCAGCTACCCCAAGTTCTTCTTTGCCAAAGCGTACACGTGAAGAGGAAGAAGATAGCACCATAGAAGCATCAGACCAGATCTCTGACGATACAGTGGAAATGCCTCTTCCAAAGAAGTTGAAAAGTGTTACACCTGTAGGAACTGAGGAAGAAGTTATTGCAGAAGAAAGTACTGATGGAGAGGTAGAGACTCAAGTATACAACCAAGATTCTCAAGATTCCATTGGAGAAGGAGTCACCCAGGGAGATTATACACCAATGGAAGACAGTGAAGAAACCTCTCAGTCTCTACAAATAGACCTTGGACCTCTTCAATCAGATCAACAAACAACATCATCACAAGATGGTCAAGGCAAAGGAGATGATGTCATCGTAATTGACAGTGATGATGAAGAGGAGGATGATGATGAAAATGATGGGGAACATGAGGATTATGAAGAAGATGAAGAAGAAGACGATGATGATGAAGATGACACAGGGATGGGAGACGAGGGTGAAGATAGTAATGAAGGCACTGGTAGTGCAGATGGCAACGATGGGTATGAAGCTGATGATGCTGAGGGTGGTGATGGGACTGATCCAGGTACAGAAACAGAAGAAAGTATGGGTGGAGGTGAAAGTAATCAGAGAGCAGCTGATTCTCAAAACAGTGGTGAAGGAAATACAGGTACTGCAGAGTCCTCTTTTTCCCAGGAGATTTCTAGAGAACAACAGCCATCATCAGCATCTGAAAGACAGACCCCTCGAGCACCTCAGTCACCAAGACGCCCACCACACCCACTTCCCCCAAGACTGACCATTCATGCTCCACCTCAAGAGCTAGGACCACCAGTTCAGAGAATCCAGATGACCCGGAGGCAGTCTGTAGGACGTGGGCTTCAGTTGACTCCAGGAATAGGTGGCATGCAGCAGCATTTTTTTGATGATGAAGATAGAACAGTTCCAAGTACCCCAACTCTTGTTGTGCCACATCGTACTGATGGATTTGCTGAAGCAATTCATTCCCCACAGGTTGCTGGTGTTCCCAGATTCCGTTTTGGGCCGCCTGAAGATATGCCACAGACGAGCTCTAGTCACTCTGATCTTGGCCAGCTTGCTTCTCAAGGGGGTTTGGGAATGTATGAAACACCCCTCTTCCTAGCTCACGAAGAGGAGTCGGGTGGCCGAAGTGTTCCCACTACTCCTCTGCAAGTAGCAGCCCCAGTGACTGTATTTACTGAGAGTACCACCTCTGATGCCTCAGAGCATGCTTCTCAGTCTGTTCCAATGGTGACAACATCCACTGGCACTTTATCCACAACGAATGAAACAGCAACAGGTGATGATGGAGATGAAGTATTTGTGGAGGCAGAATCTGAAGGTATTAGTTCAGAAGCAGGCCTCGAAATTGATAGCCAGCAGGAAGAAGAGCCGGTTCAGGCGTCTGATGAGTCAGATCTTCCTTCCACCAGCCAGGACCCTCCTTCCAGTTCTTCTGCAGATACCAGCAGTAGTCAGCCAAAGCCTTTCAGACGAGTAAGACTTCAGACAACATTGAGACAAGGTGTCCGTGGTCGTCAATTTAACAGACAGAGAGGTGTGAGCCATGCAATGGGAGGGAGAGGAGGAATAAATAGAGGAAATATTAATTAA

Related Sequences

bmy_04378T0 Protein

Length: 2409 aa      View alignments
>bmy_04378T0
MPSSGPVSKSRQRGRPMASRSYDGKVALLFREERRLTGIMWRHLADKVHSFRWLRAHCGRGRCGASGAAVNAGLDFPGSRRGSLRRAGAREPPSEVAEAAAQASGSSWSSPFFSVSAPSAAAAAVPGPIDMAAVLQQVLERTELNKLPKSVQNKLEKFLADQQSEIDGLKGRHEKFKVESEQQYFEIEKRLSHSQERLVNETRECQSLRLELEKLNSQLKALTEKNKELEVAQDRNIAIQSQFTRTKEELEAEKRDLIRTNERLSQELEYLTEDVKRLNEKLKESNATKGELQLKLDELQASEVSVKYREKRLEQEKELLHNQNTWLNTELKTKTDELLALGRDKGNEILELKCNLENKKEEVSRMEEQMNGLKTSNENLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKSNELTRAVDELHKLLKEAGEANKAIQDHLLEXEESKDQMEKEMLEKIGKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKEIQRLQENTDKANKHSSVLERDNQRMEVQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSYRNIEELQQQNQRLLIHLKLESALAEVEQLRESRRHQMQLVDSIVRQRDMYRILLSQTTGVTIPLQASSLDDSSLVSTPKRSSTSQAVSTPTPVPVIESAEAIEAKAALKQLQEIFENYRKEKADNEKMQSEQLEKLQEQVTDLRSQNTKISTQLDFASKRYEMLQDNVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETKQRLSSQIEKLEHEISHLKKKLENEVELRHTLTRNLDVQLLDTKRQLDTETNLHVNTKELLKNAQKEIATLKQHLSNVEVQLASQSSQRTGKGQPSNKEDVDDLLSQLRQAEEQVNDLKERLKTSTNNVEQYRAMVTSLEESLNKEKQVTEEVHKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQDDKRKAIESMEQQLSELKKTLSSVQNEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMMSVRQHLEETAQKAESQLLECKASWEERERMLKDEVSKSVSRCEDLEKQNRLLHDQIEKLSDKVIASMKEGVQGPLNVSLSEEGKSQEQILEILRFIRREKEIAETRFEVAQVECLRYRQRVELLERELQELQDSLNAEREKVQVTAKTMAQHEELMKKTETMNVVMETNKILREEKERLEQDLQQMQAKVRKLELDILPLQEANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHAKRIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLKEDLNKVRTEKESIQKDLDAKIIDIQEKVKTITQVKKIGRRYKTQYEELKAQQDKEQHVSVQEMQELKETLNQAETKSKSLESQVENLQKALSEKEVEARNLQEQTVQLQSELSRLRQDLQDRTTQEEQLRQQITEKEEKTRKAIVAAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYEGRISRLERELREHQERHLEQRDEPQEPTNKVPEQQRQITLKTAPTSGERGIASTSDPPTANIKPTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQEAMQSEGPVEHVPVFGSTSGSVRSTSPNVQPSIPQPILTVQQQTQATAFVQPTQQSHPQIEPTNQELSPNIVEVVQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTIEASDQISDDTVEMPLPKKLKSVTPVGTEEEVIAEESTDGEVETQVYNQDSQDSIGEGVTQGDYTPMEDSEETSQSLQIDLGPLQSDQQTTSSQDGQGKGDDVIVIDSDDEEEDDDENDGEHEDYEEDEEEDDDDEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGGESNQRAADSQNSGEGNTGTAESSFSQEISREQQPSSASERQTPRAPQSPRRPPHPLPPRLTIHAPPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPLQVAAPVTVFTESTTSDASEHASQSVPMVTTSTGTLSTTNETATGDDGDEVFVEAESEGISSEAGLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSADTSSSQPKPFRRVRLQTTLRQGVRGRQFNRQRGVSHAMGGRGGINRGNIN*