Sequence detailsbmy_04378 (Coding sequence)

Part of scaffold_144 (SequenceType object (1))

For more information consult the page for scaffold_144 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TPRENSTTRG00000012196 (Bottlenosed dolphin)

Gene Details

translocated promoter region, nuclear basket protein

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011574, Bottlenosed dolphin)

Protein Percentage 91.75%
cDNA percentage 91.91%
Ka/Ks Ratio 0.21358 (Ka = 0.0077, Ks = 0.0362)

TPRENSBTAG00000011943 (Cow)

Gene Details

nucleoprotein TPR

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000015848, Cow)

Protein Percentage 96.57%
cDNA percentage 95.2%
Ka/Ks Ratio 0.10636 (Ka = 0.0164, Ks = 0.1542)

TPR (Minke Whale)

Gene Details

translocated promoter region, nuclear basket protein

External Links

Gene match (Identifier: BACU001533, Minke Whale)

Protein Percentage 99.14%
cDNA percentage 99.13%
Ka/Ks Ratio 0.15705 (Ka = 0.0039, Ks = 0.0246)

Additional orthologs identified in other species via the OPTIC pipeline.

TPR (Human)   Tpr (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 7227 bp    Location:177017..246822   Strand:+
Raw sequence 
>bmy_04378
ATGCCCTCTAGCGGCCCAGTGTCTAAAAGCCGCCAAAGAGGACGACCCATGGCATCCCGGAGCTATGACGGTAAGGTCGCCCTCCTCTTCAGGGAGGAACGTAGGTTAACGGGTATTATGTGGCGCCACCTCGCGGATAAGGTGCACAGCTTCCGGTGGTTGCGCGCGCACTGCGGACGCGGGCGCTGCGGCGCGTCCGGTGCAGCGGTTAACGCGGGACTCGATTTCCCAGGGTCCCGCCGTGGGAGTCTCCGTCGGGCGGGCGCGCGCGAGCCACCGAGCGAGGTGGCGGAGGCAGCAGCCCAGGCTTCTGGGTCCTCTTGGTCTTCGCCTTTCTTCTCCGTTTCTGCTCCGTCGGCCGCTGCCGCCGCGGTCCCCGGCCCGATCGACATGGCGGCGGTGTTGCAGCAAGTCCTGGAGCGCACGGAATTGAACAAGCTGCCTAAGTCGGTCCAGAACAAACTTGAGAAGTTCCTTGCTGACCAGCAGTCCGAGATCGATGGCCTCAAGGGGCGGCACGAGAAATTTAAGGTGGAGAGCGAACAACAGTACTTTGAGATAGAGAAGAGGCTGTCCCACAGTCAGGAGAGACTTGTGAATGAAACCCGAGAGTGCCAAAGCTTGCGGCTTGAGCTGGAGAAGCTCAACAGTCAACTGAAGGCGCTAACTGAGAAAAACAAAGAACTTGAAGTGGCTCAGGATCGCAATATTGCCATTCAGAGCCAGTTTACAAGGACAAAGGAAGAATTAGAAGCTGAGAAAAGAGACTTAATTAGAACCAATGAGAGACTATCTCAAGAACTTGAATATTTAACAGAGGATGTTAAACGTCTAAATGAAAAACTTAAAGAAAGCAATGCAACAAAGGGTGAGCTTCAGTTAAAATTGGATGAACTTCAAGCTTCTGAGGTTTCTGTTAAGTATCGAGAAAAACGCTTGGAGCAAGAAAAAGAGTTGTTACATAATCAGAATACTTGGCTGAATACAGAGTTGAAGACCAAAACTGATGAACTTCTGGCTCTCGGCAGAGATAAAGGAAATGAAATTCTCGAGCTTAAATGTAATCTTGAAAACAAAAAAGAGGAGGTTTCTAGAATGGAAGAACAGATGAATGGCTTGAAAACATCAAATGAGAATCTTCAAAAGCATGTAGAGGATCTGTTGACCAAACTGAAAGAGGCCAAGGAACAGCAGGCCAGTATGGAAGAGAAATTCCACAATGAATTAAATGCTCACATAAAACTCTCTAACCTTTACAAGAGTGCTGCTGATGATTCAGAGGCAAAGAGCAATGAACTGACCCGAGCAGTGGATGAATTACACAAACTTTTGAAGGAAGCTGGAGAAGCCAATAAAGCAATACAAGATCATCTTCTAGAAGYAGAGGAATCTAAAGATCAAATGGAAAAAGAAATGCTYGAGAAAATAGGGAAATTAGAGAAGGAATTAGAGAATGCAAATGACCTGCTTTCTGCCACAAAACGTAAAGGGGCCATCTTGTCTGAAGAAGAGCTTGCAGCCATGTCTCCTACTGCAGCAGCCGTAGCTAAGATAGTGAAACCTGGCATGAAGCTAACTGAGCTGTATAATGCTTATGTGGAAACTCAGGATCAGCTGCTTTTGGAGAAACTAGAGAACAAAAGAATTAATAAGTATCTAGATGAAATAGTGAAAGAAGTTGAAGCCAAAGCACCAATTTTGAAACGCCAACGTGAGGAGTATGAACGTGCACAGAAAGCTGTGGCAAGTTTATCTGTTAAGCTTGAACAAGCTATGAAGGAGATTCAGCGATTGCAGGAGAACACAGATAAAGCCAATAAACATTCATCTGTGCTTGAAAGAGACAATCAAAGAATGGAAGTACAAATAAAAGATCTTTCACAACAGATTAGAGTGCTTCTGATGGAACTTGAAGAAGCGAGGGGTAACCATGTAATCCGTGATGAGGAAGTAAGCTCTGCTGATATAAGTAGTTCATCTGAAGTAATATCACAGCACCTAGTATCTTACAGAAACATTGAAGAGCTTCAACAGCAAAATCAACGTCTCTTAATTCACCTCAAACTTGAGAGCGCCCTCGCTGAAGTGGAACAACTCCGTGAATCACGGCGACATCAAATGCAGCTTGTCGATTCCATAGTTCGTCAGCGTGATATGTACCGTATTTTGTTGTCACAGACAACAGGAGTTACCATTCCTTTACAAGCTTCAAGCTTAGATGATAGTTCTCTTGTGTCAACTCCAAAACGTTCAAGTACATCACAGGCTGTTTCCACTCCTACTCCAGTACCTGTAATTGAGTCAGCAGAGGCTATAGAAGCCAAGGCTGCCCTTAAACAGTTGCAGGAAATTTTTGAGAACTACAGAAAAGAAAAGGCAGATAATGAAAAAATGCAGAGTGAGCAGCTTGAGAAACTTCAGGAGCAAGTCACAGATTTGCGATCACAAAATACCAAAATTTCTACCCAGCTAGATTTTGCTTCTAAACGTTATGAAATGCTACAAGATAATGTAAGAGCAGAAAATTTGAAAAAGGAAAAGGAAATGCTTAAACTGTCAGAAGTTCGTCTTTCTCAGCAAAGAGAATCTTTGTTGGCTGAACAAAGAGGGCAAAACTTGCTGCTAACTAATCTGCAAACAATTCAGGGAATATTGGAACGATCTGAAACAGAAACCAAACAAAGGCTTAGTAGCCAGATAGAAAAACTGGAACATGAGATATCCCATCTAAAGAAGAAGTTGGAAAATGAGGTGGAACTAAGGCATACACTTACTAGAAATCTAGATGTTCAACTTTTAGATACAAAGAGACAGCTGGATACTGAGACTAATCTTCATGTTAACACAAAAGAACTGTTAAAAAATGCTCAAAAGGAAATTGCTACATTGAAACAGCACCTCAGCAATGTGGAAGTCCAGCTTGCTTCTCAGTCCTCACAGAGAACTGGTAAAGGTCAGCCTAGCAACAAAGAAGATGTGGATGACCTTCTGAGTCAGCTAAGGCAGGCAGAAGAGCAGGTGAATGACTTGAAGGAAAGACTCAAAACAAGCACTAATAATGTGGAACAGTATCGTGCAATGGTTACTAGTTTGGAAGAGTCCCTCAACAAGGAAAAACAGGTGACAGAAGAAGTACATAAGAATATTGAAGTTCGCTTAAAAGAGTCAGCTGAGTTTCAGACACAGCTGGAAAAGAAGTTAATGGAAGTAGAGAAGGAAAAACAGGAACTTCAGGAYGACAAGAGAAAAGCCATAGAGAGCATGGAACAACAGTTATCTGAGTTAAAGAAAACACTCAGTAGTGTTCAGAATGAAGTACAAGAAGCTCTTCAGAGAGCGAGCACAGCTTTGAGTAATGAACAGCAAGCCAGACGGGACTGTCAGGAACAAGCTAAAATAGCTGTGGAAGCTCAGAATAAGTATGAGAGAGAATTGATGCTACATGCTGCTGATGTTGAAGCTCTACAAGCTGCCAAGGAACAGGTTTCCAAAATGATGTCAGTGCGTCAGCACTTGGAAGAAACAGCCCAGAAAGCAGAATCACAGTTGTTGGAGTGTAAAGCATCTTGGGAGGAAAGAGAGAGAATGTTAAAGGATGAAGTTTCCAAGAGTGTGTCTCGCTGTGAAGATCTAGAAAAACAAAACAGATTACTTCATGATCAGATTGAAAAATTAAGTGACAAAGTCATTGCCTCTATGAAGGAAGGTGTACAAGGTCCATTGAATGTATCTCTCAGTGAAGAAGGAAAATCTCAAGAACAAATTTTAGAAATTCTCAGATTTATACGACGAGAAAAAGAAATTGCTGAAACTAGGTTTGAAGTGGCTCAGGTTGAGTGTCTGCGCTATCGGCAAAGGGTTGAACTTTTAGAAAGAGAGCTGCAGGAACTGCAGGATAGTCTAAATGCTGAAAGGGAGAAAGTTCAGGTAACTGCAAAAACAATGGCCCAGCATGAGGAACTGATGAAGAAAACCGAAACAATGAATGTAGTTATGGAGACCAATAAGATTCTGAGGGAAGAAAAGGAAAGGCTAGAACAGGATCTACAACAGATGCAAGCCAAGGTGAGGAAACTGGAGTTAGATATTTTACCCTTACAAGAAGCAAATGCTGAGCTGAGTGAGAAAAGCGGTATGTTGCAAGCAGAGAAGAAGTTATTAGAAGAAGATGTCAAACGTTGGAAAGCACGTAACCAGCATCTAGTGAGTCAACAGAAAGATCCAGATACAGAAGAATATCGAAAGCTCCTTTCTGAAAAGGAAGTTCATGCTAAGCGTATTCAACAATTGACTGAAGAAATTGGAAGGCTTAAAGCTGAAATTGCAAGATCAAATGCATCTTTGACTAACAACCAGAACTTAATCCAGAGTCTAAAGGAAGATTTAAATAAAGTAAGAACTGAAAAGGAAAGCATCCAGAAGGACTTAGATGCCAAAATAATTGATATTCAAGAAAAAGTTAAAACTATTACTCAAGTCAAGAAAATTGGGCGTAGGTACAAGACTCAATATGAAGAACTTAAAGCACAACAAGATAAGGAACAGCATGTCTCAGTCCAGGAAATGCAGGAGCTCAAAGAAACCCTTAATCAAGCTGAAACAAAGTCAAAATCACTCGAGAGTCAGGTGGAGAATCTGCAGAAGGCATTATCTGAAAAAGAGGTGGAAGCAAGAAATCTCCAGGAACAGACTGTGCAGCTTCAATCTGAACTTTCACGACTTCGTCAGGACCTTCAAGATAGAACCACGCAGGAGGAGCAGCTCCGACAGCAGATAACTGAAAAGGAAGAAAAAACAAGAAAGGCTATTGTAGCAGCAAAATCAAAAATTGCACATTTAGCTGGTGTAAAAGATCAGCTAACTAAAGAAAATGAGGAGCTTAAACAAAGGAATGGAGCCTTAGATCAGCAGAAAGATGAACTGGATGTTCGTATGACTGCTCTTAAGTCCCAGTATGAAGGTCGAATTAGTCGCTTGGAAAGAGAACTCAGGGAGCATCAAGAGAGACACCTTGAGCAGAGAGATGAGCCTCAAGAACCTACTAATAAGGTCCCAGAACAGCAGAGACAGATCACGTTGAAAACAGCTCCAACTTCTGGTGAAAGAGGAATTGCCAGCACATCAGACCCACCAACAGCCAATATCAAGCCAACTCCTGTTGTGTCTACTCCAAGTAAAGTGACAGCTGCAGCTATGGCTGGGAATAAGTCAACACCCAGGGCTAGTATCCGCCCAATGGTTACACCTGCAACTGTTACAAATCCTACTACTACCCCAACAGCTACAGTGATGCCCACTACACAAGTGGAATCACAAGAAGCCATGCAATCAGAAGGGCCTGTGGAACATGTTCCAGTTTTCGGAAGCACAAGTGGATCTGTTCGTTCTACTAGTCCTAACGTCCAGCCTTCTATCCCTCAACCCATTTTAACTGTTCAGCAACAAACACAGGCTACAGCTTTTGTGCAACCCACTCAACAGAGTCATCCTCAGATTGAGCCTACAAATCAAGAGCTTTCMCCAAACATAGTGGAGGTGGTTCAGAGTTCACCAGTTGAGCGACCTTCTACTTCCACAGCAGTGTTTGGCACTGTTTCAGCTACCCCAAGTTCTTCTTTGCCAAAGCGTACACGTGAAGAGGAAGAAGATAGCACCATAGAAGCATCAGACCAGATCTCTGACGATACAGTGGAAATGCCTCTTCCAAAGAAGTTGAAAAGTGTTACACCTGTAGGAACTGAGGAAGAAGTTATTGCAGAAGAAAGTACTGATGGAGAGGTAGAGACTCAAGTATACAACCAAGATTCTCAAGATTCCATTGGAGAAGGAGTCACCCAGGGAGATTATACACCAATGGAAGACAGTGAAGAAACCTCTCAGTCTCTACAAATAGACCTTGGACCTCTTCAATCAGATCAACAAACAACATCATCACAAGATGGTCAAGGCAAAGGAGATGATGTCATCGTAATTGACAGTGATGATGAAGAGGAGGATGATGATGAAAATGATGGGGAACATGAGGATTATGAAGAAGATGAAGAAGAAGACGATGATGATGAAGATGACACAGGGATGGGAGACGAGGGTGAAGATAGTAATGAAGGCACTGGTAGTGCAGATGGCAACGATGGGTATGAAGCTGATGATGCTGAGGGTGGTGATGGGACTGATCCAGGTACAGAAACAGAAGAAAGTATGGGTGGAGGTGAAAGTAATCAGAGAGCAGCTGATTCTCAAAACAGTGGTGAAGGAAATACAGGTACTGCAGAGTCCTCTTTTTCCCAGGAGATTTCTAGAGAACAACAGCCATCATCAGCATCTGAAAGACAGACCCCTCGAGCACCTCAGTCACCAAGACGCCCACCACACCCACTTCCCCCAAGACTGACCATTCATGCTCCACCTCAAGAGCTAGGACCACCAGTTCAGAGAATCCAGATGACCCGGAGGCAGTCTGTAGGACGTGGGCTTCAGTTGACTCCAGGAATAGGTGGCATGCAGCAGCATTTTTTTGATGATGAAGATAGAACAGTTCCAAGTACCCCAACTCTTGTTGTGCCACATCGTACTGATGGATTTGCTGAAGCAATTCATTCCCCACAGGTTGCTGGTGTTCCCAGATTCCGTTTTGGGCCGCCTGAAGATATGCCACAGACGAGCTCTAGTCACTCTGATCTTGGCCAGCTTGCTTCTCAAGGGGGTTTGGGAATGTATGAAACACCCCTCTTCCTAGCTCACGAAGAGGAGTCGGGTGGCCGAAGTGTTCCCACTACTCCTCTGCAAGTAGCAGCCCCAGTGACTGTATTTACTGAGAGTACCACCTCTGATGCCTCAGAGCATGCTTCTCAGTCTGTTCCAATGGTGACAACATCCACTGGCACTTTATCCACAACGAATGAAACAGCAACAGGTGATGATGGAGATGAAGTATTTGTGGAGGCAGAATCTGAAGGTATTAGTTCAGAAGCAGGCCTCGAAATTGATAGCCAGCAGGAAGAAGAGCCGGTTCAGGCGTCTGATGAGTCAGATCTTCCTTCCACCAGCCAGGACCCTCCTTCCAGTTCTTCTGCAGATACCAGCAGTAGTCAGCCAAAGCCTTTCAGACGAGTAAGACTTCAGACAACATTGAGACAAGGTGTCCGTGGTCGTCAATTTAACAGACAGAGAGGTGTGAGCCATGCAATGGGAGGGAGAGGAGGAATAAATAGAGGAAATATTAATTAA

Related Sequences

bmy_04378T0 SequenceType object (3)

Length: 2409 aa      View alignments
>bmy_04378T0
MPSSGPVSKSRQRGRPMASRSYDGKVALLFREERRLTGIMWRHLADKVHSFRWLRAHCGRGRCGASGAAVNAGLDFPGSRRGSLRRAGAREPPSEVAEAAAQASGSSWSSPFFSVSAPSAAAAAVPGPIDMAAVLQQVLERTELNKLPKSVQNKLEKFLADQQSEIDGLKGRHEKFKVESEQQYFEIEKRLSHSQERLVNETRECQSLRLELEKLNSQLKALTEKNKELEVAQDRNIAIQSQFTRTKEELEAEKRDLIRTNERLSQELEYLTEDVKRLNEKLKESNATKGELQLKLDELQASEVSVKYREKRLEQEKELLHNQNTWLNTELKTKTDELLALGRDKGNEILELKCNLENKKEEVSRMEEQMNGLKTSNENLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKSNELTRAVDELHKLLKEAGEANKAIQDHLLEXEESKDQMEKEMLEKIGKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKEIQRLQENTDKANKHSSVLERDNQRMEVQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSYRNIEELQQQNQRLLIHLKLESALAEVEQLRESRRHQMQLVDSIVRQRDMYRILLSQTTGVTIPLQASSLDDSSLVSTPKRSSTSQAVSTPTPVPVIESAEAIEAKAALKQLQEIFENYRKEKADNEKMQSEQLEKLQEQVTDLRSQNTKISTQLDFASKRYEMLQDNVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETKQRLSSQIEKLEHEISHLKKKLENEVELRHTLTRNLDVQLLDTKRQLDTETNLHVNTKELLKNAQKEIATLKQHLSNVEVQLASQSSQRTGKGQPSNKEDVDDLLSQLRQAEEQVNDLKERLKTSTNNVEQYRAMVTSLEESLNKEKQVTEEVHKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQDDKRKAIESMEQQLSELKKTLSSVQNEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMMSVRQHLEETAQKAESQLLECKASWEERERMLKDEVSKSVSRCEDLEKQNRLLHDQIEKLSDKVIASMKEGVQGPLNVSLSEEGKSQEQILEILRFIRREKEIAETRFEVAQVECLRYRQRVELLERELQELQDSLNAEREKVQVTAKTMAQHEELMKKTETMNVVMETNKILREEKERLEQDLQQMQAKVRKLELDILPLQEANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHAKRIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLKEDLNKVRTEKESIQKDLDAKIIDIQEKVKTITQVKKIGRRYKTQYEELKAQQDKEQHVSVQEMQELKETLNQAETKSKSLESQVENLQKALSEKEVEARNLQEQTVQLQSELSRLRQDLQDRTTQEEQLRQQITEKEEKTRKAIVAAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYEGRISRLERELREHQERHLEQRDEPQEPTNKVPEQQRQITLKTAPTSGERGIASTSDPPTANIKPTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQEAMQSEGPVEHVPVFGSTSGSVRSTSPNVQPSIPQPILTVQQQTQATAFVQPTQQSHPQIEPTNQELSPNIVEVVQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTIEASDQISDDTVEMPLPKKLKSVTPVGTEEEVIAEESTDGEVETQVYNQDSQDSIGEGVTQGDYTPMEDSEETSQSLQIDLGPLQSDQQTTSSQDGQGKGDDVIVIDSDDEEEDDDENDGEHEDYEEDEEEDDDDEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGGESNQRAADSQNSGEGNTGTAESSFSQEISREQQPSSASERQTPRAPQSPRRPPHPLPPRLTIHAPPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPLQVAAPVTVFTESTTSDASEHASQSVPMVTTSTGTLSTTNETATGDDGDEVFVEAESEGISSEAGLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSADTSSSQPKPFRRVRLQTTLRQGVRGRQFNRQRGVSHAMGGRGGINRGNIN*