Sequence detailsbmy_04379 (Coding sequence)

Part of scaffold_144 (SequenceType object (1))

For more information consult the page for scaffold_144 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PRG4ENSTTRG00000012178 (Bottlenosed dolphin)

Gene Details

proteoglycan 4

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011554, Bottlenosed dolphin)

Protein Percentage 14.14%
cDNA percentage 31.5%
Ka/Ks Ratio 0.28212 (Ka = 2.124, Ks = 7.5289)

PRG4ENSBTAG00000011932 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000015839, Cow)

Protein Percentage 16.46%
cDNA percentage 33.95%
Ka/Ks Ratio 0.31573 (Ka = 1.8834, Ks = 5.9654)

PRG4 (Minke Whale)

Gene Details

proteoglycan 4

External Links

Gene match (Identifier: BACU019912, Minke Whale)

Protein Percentage 14.89%
cDNA percentage 33.26%
Ka/Ks Ratio 0.2447 (Ka = 1.849, Ks = 7.5562)

Genome Location

Sequence SequenceType object (2)

Length: 3084 bp    Location:246690..177280   Strand:-
Raw sequence 
>bmy_04379
ATGGAGCCTCCCACTACTCCCAAGGGCCCTGCTGAATCACCTCCTGAGTTTCCTGTAGAACCCACACCAAAGACTCTTGAAAACAGTCCCAAGGAGCCTGCTGTACCTACAACCAAGGCTCCTGAAGTGACCAAACCTGAAATGACTACAACAGCTAAAGACAAGGCCACAGAAAAAGACACAACTGATACCAYGGCATCATCCAAAATTACTCTTAAAGCAACAACTCTTGCACCCAAAGTAATGACAGCAACAAAAAAGACAACTGAAGAGACTACAAGCAAACCTGAACCAACAACAGCTATACCAAAAGGTACAGCTACTAACTCTCAAGTGACAACTCCTAAACCCCAAAAGCCAACCAAAGCACCCAAAAAGCTCACTTGTACCAAAAAGCCAAAAACACCTAAAGTGAGAAAACCAAAGACTACACCAACTCCCCCAAAGATGACATCAGCAAACCCTACCTCTTTAGCAGAAGCCAAGCTCCAAACCACCACCAGCCCTAACCAAACTCCCAACTCAGAAATAATCGAAGTAAATACAAAGAATGAAGATGCAGATGCTACTGAAGGAGAAAAACCTCACATGATTCCTAGGCCCCCTGTGTTAACTCCTATAGTTATTCCAGGCACTGATTTCATAGGGAGAGGACCCAGTCAAGGCATTGGCATCAACCCCATGTTTTCAGATGAGACTAATTTATGCAACGGTAGGCCAGTAGATGGACTGACTGCTTTGCGCAATGGGACACTAGTTGCATTTCGAGGTCATTATTTCTGGATGCTAAATGCATTCAGTCCACCATCTCCACCTCGCAGAATTACTGAAGTTTGGGGCATTCCCTCCCCCATTGATACTGTTTTTACTAGATGCAACTGTGAAGGAAAAACTTTCTTCTTTAAGGATTCTCAGTACTGGCGTTTCACCAATGATATAAAAGATGCAGGGTATCCCAAACTGATTCCCAAAGGATTTGGAGGACTAAATGGAAAAATAGTGGCAGCTCTCTCAATAGCTAAATACAAGAACAGACCTGAATCTGTGTATTTTTTCAAGAGAGGTGGCAGCATTCAGCAGTATACTTATAAACAGGAACCCACCCAAAAGTGTACTAGAAGAAAGCTTGCGATAAATTATTCAGTGTATGGAGAAACGACACAGGTTAGGAGACGTCGATTTGAACGTGCTATAGAACCTTCTCAAACACACACCATCAGAATTCACTATTCACCCATCAGAGTCACTTATCAAGACAAAGCTGTATCACTGCCCAACATCAGAAAACCTGATGGCTACGATTACTATGCCTTTTCTAAAGGGACATTTAACAAACAGAAAAGAAAGCCTTCTTTCTTGGGGAAAAGTTCAAGCAGCGACATTAATGGAAGGCAAATCCATCAGTACGATGTGGCACAACAAGAGTTGGGGTACTTGGAACTGTTCTATCTTCATCATCAAAAAAATGCTGCTGCTAAAAAGACAGAAAACAAAGGCATTTCCACTGTATCGTCAGAGATCTGGTCTGATGCTTCTATGGTGCTATCTTCTTCCTCTTCACGTGTACGCTTTGGCAAAGAAGAACTTGGGTTATCTGCTGTCGGAGCTGCTCCTCCTGCGTGGTTCTATCTTGAAGGTCCTGACGAAGTCGTGAAAGTTCAGATTGAAGCTGCACAATCTTCACAGCGAGACACACTCTTGGAAACTTCATCCTATAAGCCAAGAGTCTATCATAATAGATTTTCCAATATGCTTTACACTCCAACAACTGTGATTCTGCTTTCTGGGCTGTTTCTTCCAAGTGCTGACGCACTGACATCATTTTGGAAACCTGTTCCTTGGCAGCTTGTAGAGCTTCAACATCAGCAGCATTATCCACAAAGAATAGGCTATTTATCTACAGGATACGTTATAAACCTAAAGAGATCGTTCCAATATTCCCTAAGGGCAGCCTTGGCTTCTATAGCCTCTGCTGACTCAATTACAGGTACTGGAGTAGGAGTGGAAACAGCCTGTGATGTACTTGAACGTTTTGGAGTTGACACAAGAGAACTATCATCTAAGCTTGAAGCTTCAGAAACTTTAGGAATGGAACCAACCTTCATAGCTTGTTCAAGCTTAACAGATAAACTTGCCACAGCTTTCTGTGCACGTTCATACTCCTCACTTTCTCCAAAAGCAGCTGATCCTGAGTTTCCACATAAGCATTATACAGCTGAAAGGAGAAGAGGGATTACATTTAAGCTCGAGAATTTCATTTCCTTTATCTCTGCCGAGAGCCAGAAGTTCATCAGTTTTGGTCTTCAACTCTGTATTCAGCCAAGTATTCTGATTATAATTTTCAATCCACTTAGCAAAAACCAGTTACCAATCCCGCACCGCCCCCCCCCCCACCAAAAAAACCTGGTAAACCAAGACACACAACCTGGCTCCTTCGTATCAAACTGTGAAGGAARCAGTTACGAGAAGGCCTATGGTGCCCACGGAGCCGGAGAAGCGATGCTAGCAGTGAAGCCGTGGACGGGGCGAGCTTGCAAGGGGAGGAGACCAGCCATCGCTGGGGTCGCGCCCAGAAACAAGGGCGGGAAGAGCGTCGCACTTACCGCTCTCCACCTTAAATTTCTCGTGCCGCCCCTTGAGGCCATCGATCTCGGACTGCTGGTCAGCAAGGAACTTCTCAAGTTTGTTCTGGACCGACTTAGGCAGCTTGTTCAATTCCGTGCGCTCCAGGACTTGCTGCAACACCGCCGCCATGTCGATCGGGCCGGGGACCGCGGCGGCAGCGGCCGACGGAGCAGAAACGGAGAAGAAAGGCGAAGACCAAGAGGACCCAGAAGCCTGGGCTGCTGCCTCCGCCACCTCGCTCGGTGGCTCGCGCGCGCCCGCCCGACGGAGACTCCCACGGCGGGACCCTGGGAAATCGAGTCCCGCGTTAACCGCTGCACCGGACGCGCCGCAGCGCCCGCGTCCGCAGTGCGCGCGCAACCACCGGAAGCTGTGCACCCTGGGAATACGAGTTCAGAGGCAGCCTCTGACCCCTGTCGTGCACTCCGCTTTCCGGCCCCCTTTTCCACCCGCTTCTAG

Related Sequences

bmy_04379T0 SequenceType object (3)

Length: 1028 aa      View alignments
>bmy_04379T0
MEPPTTPKGPAESPPEFPVEPTPKTLENSPKEPAVPTTKAPEVTKPEMTTTAKDKATEKDTTDTXASSKITLKATTLAPKVMTATKKTTEETTSKPEPTTAIPKGTATNSQVTTPKPQKPTKAPKKLTCTKKPKTPKVRKPKTTPTPPKMTSANPTSLAEAKLQTTTSPNQTPNSEIIEVNTKNEDADATEGEKPHMIPRPPVLTPIVIPGTDFIGRGPSQGIGINPMFSDETNLCNGRPVDGLTALRNGTLVAFRGHYFWMLNAFSPPSPPRRITEVWGIPSPIDTVFTRCNCEGKTFFFKDSQYWRFTNDIKDAGYPKLIPKGFGGLNGKIVAALSIAKYKNRPESVYFFKRGGSIQQYTYKQEPTQKCTRRKLAINYSVYGETTQVRRRRFERAIEPSQTHTIRIHYSPIRVTYQDKAVSLPNIRKPDGYDYYAFSKGTFNKQKRKPSFLGKSSSSDINGRQIHQYDVAQQELGYLELFYLHHQKNAAAKKTENKGISTVSSEIWSDASMVLSSSSSRVRFGKEELGLSAVGAAPPAWFYLEGPDEVVKVQIEAAQSSQRDTLLETSSYKPRVYHNRFSNMLYTPTTVILLSGLFLPSADALTSFWKPVPWQLVELQHQQHYPQRIGYLSTGYVINLKRSFQYSLRAALASIASADSITGTGVGVETACDVLERFGVDTRELSSKLEASETLGMEPTFIACSSLTDKLATAFCARSYSSLSPKAADPEFPHKHYTAERRRGITFKLENFISFISAESQKFISFGLQLCIQPSILIIIFNPLSKNQLPIPHRPPPHQKNLVNQDTQPGSFVSNCEGXSYEKAYGAHGAGEAMLAVKPWTGRACKGRRPAIAGVAPRNKGGKSVALTALHLKFLVPPLEAIDLGLLVSKELLKFVLDRLRQLVQFRALQDLLQHRRHVDRAGDRGGSGRRSRNGEERRRPRGPRSLGCCLRHLARWLARARPTETPTAGPWEIESRVNRCTGRAAAPASAVRAQPPEAVHPGNTSSEAASDPCRALRFPAPFSTRF*