Part of scaffold_144 (Scaffold)

For more information consult the page for scaffold_144 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRMT1L ENSTTRG00000005892 (Bottlenosed dolphin)

Gene Details

tRNA methyltransferase 1 homolog (S. cerevisiae)-like

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005578, Bottlenosed dolphin)

Protein Percentage 96.49%
cDNA percentage 96.68%
Ka/Ks Ratio 0.2537 (Ka = 0.006, Ks = 0.0236)

TRMT1L ENSBTAG00000011285 (Cow)

Gene Details

TRMT1-like protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014994, Cow)

Protein Percentage 96.75%
cDNA percentage 96.19%
Ka/Ks Ratio 0.1427 (Ka = 0.0153, Ks = 0.1076)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2214 bp    Location:1424056..1460795   Strand:+
>bmy_04390
ATGGAGAATATGGCGGAGGAGGAGCTGCTGCCCCAGGAGAAGGAGGAGGATGAGGAGGTGGAAGTGGCCCAGGTCCAGGTCCCGACCCCAGCCCCGGACTCGGCTCGGGTCCCAGCTCCGGCCCCGGATTCGGCTCCGGCCTCGGCCCCGACTCCGGCCTCGGCTCCAGTCCCAGCCCCTGCCCTGGCCCAGGCTCCGACCCTGTCCCCGTCCCTAGCCTCTGCCCCTGATGAGGCTGAAAGCAAGAGACACATCTCGATTCAAAGGCAGCTTGCTGATCTAGAGAAGTTAGCTTTCGTAACTGAAGGGGATTTTGACTCTGCCAGTTCACTGAACTCAGATAATCTTGATGCAGGAAACAAACAGGCTTGTCCATTGTGCCCCAAGGAAAAATTCAGAGCTTGTAATAGTCATAAGCTTCATCGTCACCTTCAAAATTTACACTGGAAAGTCTCAGTTGAATTTGAAGGTTACAGGATGTGCATCTGTCACTTACCTTGTCGACCAGTGAAACCAAACATTATTGGAGAACAGATATCCAGTAAAATGGGAGCCCATTATCATTGTATTATTTGTTCAGCAACAATCACCAGAAGGACGGATATGCTAGGACATGTTAGGCGCCATGTGAATAAAGGAGAGACTAAATCCACGTATATTGCTGCTTCTGCTGCCAAACCACCTAATGAAATTTTGAAAGAGGCAGACACAGATGTACAAGTTTGTCCCAACTATTCTGTACCTCAGAAAACAGATTCCTATTTTAATCCCAAAATGAAACTAAATCGGCAGCTAATATTCTGTACACTGGCTGCTTTGGCTAAGGAACGAAAACCTTTGGAATGTCTAGATGCCTTTGGAGCTACTGGGATAATGGGATTACAATGGGCAAAACACCTTGGAAATGCAGTCAAGGTTACAATTAATGATTTGAATGAAAACTCTGTGACGTTGATTCAGGAGAACTGCCATTTAAACAAATTGAAAGTGGTGGTGGACAGTAAGGAAAAGGAAGAGAGTGATGATATTCCTGAAGAAGGAGAGGAAAACTTTGGTAATATTAAGGTGACCAAAATGGATGCCAATGTACTGATGCATTTGAGATCTTTTGATTTCATACACCTAGACCCTTTTGGAACATCTGTGAACTATCTTGATTCTGCATTCAGAAATATAAGAAACCTTGGCATAGTGTCAGTGACTTCTACAGATATCAGTTCTTTATATGCCAAGGCACAACATGTTGCCCGGCGTCACTACGGCTGTAACATTGTCCGAACTGAATATTACAAGGAGCTAGCAGCCAGAATTGTTGTAGCTGCAGTGGCAAGAGCTGCAGCCCGATGTAACAAAGGCATAGAAGTACTGTTTGCAGTGGCTCTGGAACATTTTGTATTGGTTGTTGTGAGAGTTTTGAGGGGGCCTACTTCTGCAGATGAAACAGCCAAGAAGATTCAGTACCTAATCCATTGTCAGTGGTGTGAAGAGAGAATTTTTCAGAAGGATGGTAATATGGTAGAAGATTACAGTGCTAACTTTATTTCCTATACTGGATTTCCTTTCATCAACAGACAAGACATTCGTGTGAAAAACCCATATAGACAGCTACCCTGTAACTGTCATGGAAGCATGCCTGGAAAGACAGCAATAGAACTTGGACCTCTATGGTCAAGTTCCCTTTTCAATACTGGATTCCTCAAAAGAATGCTATTTGAATCTCTTCACCATGGTTTAGATGACATTCAGACCCTAATAAAGACATTAATCTTTGAGTCAGAGTGTACTCCTCAAAGTCAGTTTTCAGTTCATGCACCTTCAAATCTCAACAAGCAAGGAAAGAGAAGAAGTAACGAAACAACCACAAATTTAGCCAAGAGGCAAAAGACTGATGTCAATACTGAACATCCTCCCTTTTATTACAACATCCACAGACACAGCATTAAAGGAATGAATATGCCAAAGTTAAAAAAGTTTTTGTGCTGTCTTTCTCAAGCAGGCTTTCGAGTAAGCCGAACTCATTTTGACCCGATGGGTGTCCGTACAGATGCACCTCTAATGCAGTTTAAATCTATCCTTTTAAAGTACAGCACCCCCACCTACACTGGAGGACAGTCAGAGGGCCATGTCCAACCAGCGTCCGAAGATACAGTAGCCGACGGGGTTGAAACGTCAGTGAATGACAAAGCAGAAGCAAGTGGCTGCAGAAGATGGTAA

Related Sequences

bmy_04390T0 Protein

Length: 738 aa      View alignments
>bmy_04390T0
MENMAEEELLPQEKEEDEEVEVAQVQVPTPAPDSARVPAPAPDSAPASAPTPASAPVPAPALAQAPTLSPSLASAPDEAESKRHISIQRQLADLEKLAFVTEGDFDSASSLNSDNLDAGNKQACPLCPKEKFRACNSHKLHRHLQNLHWKVSVEFEGYRMCICHLPCRPVKPNIIGEQISSKMGAHYHCIICSATITRRTDMLGHVRRHVNKGETKSTYIAASAAKPPNEILKEADTDVQVCPNYSVPQKTDSYFNPKMKLNRQLIFCTLAALAKERKPLECLDAFGATGIMGLQWAKHLGNAVKVTINDLNENSVTLIQENCHLNKLKVVVDSKEKEESDDIPEEGEENFGNIKVTKMDANVLMHLRSFDFIHLDPFGTSVNYLDSAFRNIRNLGIVSVTSTDISSLYAKAQHVARRHYGCNIVRTEYYKELAARIVVAAVARAAARCNKGIEVLFAVALEHFVLVVVRVLRGPTSADETAKKIQYLIHCQWCEERIFQKDGNMVEDYSANFISYTGFPFINRQDIRVKNPYRQLPCNCHGSMPGKTAIELGPLWSSSLFNTGFLKRMLFESLHHGLDDIQTLIKTLIFESECTPQSQFSVHAPSNLNKQGKRRSNETTTNLAKRQKTDVNTEHPPFYYNIHRHSIKGMNMPKLKKFLCCLSQAGFRVSRTHFDPMGVRTDAPLMQFKSILLKYSTPTYTGGQSEGHVQPASEDTVADGVETSVNDKAEASGCRRW*