Part of scaffold_143 (Scaffold)

For more information consult the page for scaffold_143 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SIRT1 ENSTTRG00000016262 (Bottlenosed dolphin)

Gene Details

sirtuin 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015416, Bottlenosed dolphin)

Protein Percentage 97.4%
cDNA percentage 98.11%
Ka/Ks Ratio 0.35034 (Ka = 0.0132, Ks = 0.0376)

SIRT1 ENSBTAG00000014023 (Cow)

Gene Details

NAD-dependent deacetylase sirtuin-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018630, Cow)

Protein Percentage 91.98%
cDNA percentage 92.4%
Ka/Ks Ratio 0.26558 (Ka = 0.0525, Ks = 0.1978)

SIRT1  (Minke Whale)

Gene Details

sirtuin 1

External Links

Gene match (Identifier: BACU001957, Minke Whale)

Protein Percentage 96.34%
cDNA percentage 97.3%
Ka/Ks Ratio 0.35116 (Ka = 0.0195, Ks = 0.0555)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2190 bp    Location:9992..33715   Strand:+
>bmy_04396
ATGGTTATATTTGTACGACTTTTTTGGATCTTCATAATTTTAGCTGCAGATTGTTTCAGAAACCTTGAGTTCCTTTTGGTTTCTTTTGCAGATAACCTTCTGTTTGGTGATGAAATCATCACCAACGGTTTCCATTCGTGTGAAAGTGATGAGGATGATAGAGCCTCACATGCGAGTTCTAGTGACTGGACTCCAAGACCACGGATAGTGTGGGCTTTCGGGACTGGTCCATATACTTTTGTTCAGCAACATCTCATGATTGGCACAGATCCTCGAACGATTCTTAAAGATTTACTGCCAGAAACAATTCCTCCACCTGAATTGGACGATATGACACTGTGGCAGATTGTTATTAATATCCTTTCAGAACCACCAAAAAGGAAAAAAAGAAAAGATATTAATACAATTGAAGATGCTGTGAAATTACTGCAAGAGTGCAAAAAAATAATAGTTCTAACTGGAGCTGGGGTTTCTGTTTCTTGTGGAATACCTGACTTCAGGTCAAGAGATGGTATTTATGCTCGCCTTGCAGTAGACTTTCCAGACCTTCCAGATCCTCAAGCAATGTTTGACATTGAATATTTCAGAAAAGATCCAAGACCATTCTTCAAGTTTGCAAAGTATATACTAAATTGCCTGACACTTGGGGAAAATGTGGTAACTGAGAATACAAATAGCAAGGGTGAGGATGAGGCACACAAAAGTTCATTCCAGGAGGATGGAGTCCTGGTGTTCGTGCTGCCCAGCCTTGTTCTGGAGCTGTTTCCAGAGGGGAGGTTTGCAAGCATTTATAAGAGATGTTTGTGGGTCGACTTTATCCTTTCCAAGAGGCCATGTTCACTAATTGCTGAGTTTTACACATATGACAGCAACAATCCTTTCGAAATATATCCTGGACAATTCCAACCATCTCTTTGTCACAAATTCATAGCCTTGTCAGATAAGGAAGGAAAACTACTTCGCAACTATACTCAGAACATAGATACACTGGAACAGGTTGCAGGAATCCAAAGGATAATTCAGTGTCATGGTTCCTTTGCAACAGCATCTTGCCTGATTTGTAAATATAAAGTTGACTGTGAAGCTGTACGAGGAGATATTTTTAATCAGGTGGTTCCTCGATGTCCTAGGTGCCCAGCTGATGAACCACTTGCTATCATGAAACCAGAGATTGTCTTTTTTGGTGAAAATTTACCAGAACAGTTTCATAGAGCCATGAAGTATGACAAAGATGAAGTTGATCTTCTCATTGTTATTGGGTCTTCCCTGAAAGTAAGACCAGTAGCACTAATTCCGAGTTCCATACCCCATGAAGTGCCTCAGATATTAATTAATAGGGAACCTTTGCCTCACCTGCATTTTGATGTAGAGCTTCTTGGAGACTGTGATGTCATTATTAATGAATTGTGTCACAGGTTAGGTGGTGAATACGCCAAACTTTGCTGCAGCCCTGTAAAGCTTTCAGAAATTACTGAAAAACCTCCACGAACACAAAAAGAATTGGCTCATTTGTCAGAGTTGCCACCCACACCCCTCAATATTTCAGAAGGCTCGAGTTCACCAGAAGGAACCTCACCAGCAGATTCTTCAGTGATTGTCACTCTTTTAGACCAAGAAACAAAGAGTAATGGTGATGATCCAGATGTGTCTGAATCAAAAAACTGTGTCGAAGAAAAATCACAGGAAGTACAGACTTCTGCTAGGAGCATTGAAAGTGTTAATGAACAGTTGGAGAGTCCGGATTTGAAGAATGTTGCCTCCAATACTGGGGAGAAAAATGAAAGAACTTCAGTTGCTGAAACAGTGAGAAAATGCTGGCCAGCTAGACTCRCAAAGGAGCAGATTAGTAAACGGCTTGATGGTAATCAATATCTGTTTTTACCACCAAACCGTTATATTTTCCATGGTGCTGAGGTATATTCAGACTCTGAAGATGATGTCTTATCCTCTAGTTCTTGTGGCAGTAACAGTGATAGTGGCACATGCCAGAGTCCAAGTTTAGAAGAACCTATGGAGGATGAAAGTGAGATTGAAGAATTTTACAATGGTTTGGAAGATGATGCTGATGTTAATGAGAGAGCCGGAGGAACTGGATTTGGAGCTGATGGAGGTRATCAAGAGGCAGTTAATGAAGCTACATCTATGAARCAGGAAGCAACAAGCATTAACTATCCATCGAACAAATCATAA

Related Sequences

bmy_04396T0 Protein

Length: 730 aa      View alignments
>bmy_04396T0
MVIFVRLFWIFIILAADCFRNLEFLLVSFADNLLFGDEIITNGFHSCESDEDDRASHASSSDWTPRPRIVWAFGTGPYTFVQQHLMIGTDPRTILKDLLPETIPPPELDDMTLWQIVINILSEPPKRKKRKDINTIEDAVKLLQECKKIIVLTGAGVSVSCGIPDFRSRDGIYARLAVDFPDLPDPQAMFDIEYFRKDPRPFFKFAKYILNCLTLGENVVTENTNSKGEDEAHKSSFQEDGVLVFVLPSLVLELFPEGRFASIYKRCLWVDFILSKRPCSLIAEFYTYDSNNPFEIYPGQFQPSLCHKFIALSDKEGKLLRNYTQNIDTLEQVAGIQRIIQCHGSFATASCLICKYKVDCEAVRGDIFNQVVPRCPRCPADEPLAIMKPEIVFFGENLPEQFHRAMKYDKDEVDLLIVIGSSLKVRPVALIPSSIPHEVPQILINREPLPHLHFDVELLGDCDVIINELCHRLGGEYAKLCCSPVKLSEITEKPPRTQKELAHLSELPPTPLNISEGSSSPEGTSPADSSVIVTLLDQETKSNGDDPDVSESKNCVEEKSQEVQTSARSIESVNEQLESPDLKNVASNTGEKNERTSVAETVRKCWPARLXKEQISKRLDGNQYLFLPPNRYIFHGAEVYSDSEDDVLSSSSCGSNSDSGTCQSPSLEEPMEDESEIEEFYNGLEDDADVNERAGGTGFGADGGBQEAVNEATSMKQEATSINYPSNKS*