Sequence detailsbmy_04415 (Coding sequence)

Part of scaffold_143 (SequenceType object (1))

For more information consult the page for scaffold_143 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DDX21ENSBTAG00000014558 (Cow)

Gene Details

nucleolar RNA helicase 2

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019351, Cow)

Protein Percentage 94.26%
cDNA percentage 93.88%
Ka/Ks Ratio 0.17455 (Ka = 0.0297, Ks = 0.1701)

DDX21 (Minke Whale)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box helicase 21

External Links

Gene match (Identifier: BACU001947, Minke Whale)

Protein Percentage 97.7%
cDNA percentage 97.99%
Ka/Ks Ratio 0.39002 (Ka = 0.0154, Ks = 0.0394)

Additional orthologs identified in other species via the OPTIC pipeline.

DDX21 (Human)   Ddx21 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2358 bp    Location:827796..849505   Strand:+
Raw sequence 
>bmy_04415
ATGCCGGGGAAACTTCTTAGTGAGGCGGATTTGGAGTCGGACACGGCCATGGCGAAAGTGGAGATGCCGCGAAAGCAAAATGAGAAGAAAGGTAAAAAAGAGAAGCCAAAATCTAATAAGACTGAAGAGGCAGCAGAAGAAAAGGAAGAAACGATTTCCCCCAAAGCTAAAAAGGTTAAAAAGAAAGCAGGGCCTTCTGAGGCTGACTTGAGTTCTCCTAAATCCAAAAAGGCAAAAAAGAAAGAGGAGCCATCTCAAGATGACATTATATCTCCTAAAACCAAAAGGGCGAAAAAATCAAAGGAGCCCTGTGAAAAGACAGTTGTTTCTCCTAAAACCAAAAAACTAATAAAAAATGAGGAGCCTTCTGAGGACGACTTGGGTGCGCCTAAGTCCAAGAAGATGAAGAAAGAAAAAGAAATGAATGGAGAAATTGGAGAGAAAAGCCCCAACCTGAAGAATGGATTCCCTCATTCTGGACCTGACTCCGACTCCAAGGAAGCTGCCAGTGAAGAAAGTAACAGTGAGTTAGAGCAGGAGATAACTGTGGAGCAAAAAGAAGGAGCTTTCTCTAATTTTCCCATATCTGAAGAAACTATTAAACTTCTCAAAGCCCGTGGGGTGACCTTCCTGTTTCCTATACAAGCAAAGACGTTTCACCACGTCTATAGTGGGAAGGACTTGATCGCACAGGCACGGACAGGAACTGGGAAGACATTCTCCTTTGCTATCCCTTTGGTTGAGAAACTTCAGGGAGAGCTGCAAGACCGGAAGAGAGGCCGTGCCCCTCAGGTACTGGTTCTTACACCCACAAGGGAGTTGGCAAGTCAAGTAAGCAGAGACTTCAGTGATGTCACAAAAAAGCTGGCAGTGGCTTGTTTTTATGGTGGAACTCCCTACGGAGGACAAATTGAACGCATGCGGAATGGGATTGATATCCTGGTTGGGACACCAGGTCGTATCAAAGACCACCTGCAGAACGGCAAGCTAGATCTCACCAAACTTAAGCATGTTGTCCTGGATGAAGTTGACCAGATGTTGGACATGGGCTTTGCTGATCAAGTGGAAGAGATTTTATGTGTGGCATACAAGAAAGATTCAGAAGACAATCCCCAAACATTGCTTTTTTCTGCAACTTGCCCTCATTGGGTTTATAATGTTGCTAAGAAATACATGAAATCTACATATGAACAAGTGGACCTGATTGGTAAAAAGACCCAGAAAACGGCAATAACTGTAGAGCATCTGGCTGTCAAGTGCCACTGGACTCAAAGGGCAGCAGTTATTGGGGACGTGATCCGAGTGTACAGTGGTTACCAAGGGCGCACTATCATCTTCTGTGAAACCAAGAAAGAAGCCCAGGAGTTGTCACAGAATGTGTCCATAAGGCAGGATGCCCAGTCATTACACGGAGACATTCCACAGAAGCAAAGGGAAATCACCCTGAAGGGTTTTAGAAATGGTGATTTTGGAGTTTTGGTTGCAACCAATGTCGCTGCACGTGGGTTAGACATCCCCGAGGTTGATCTGGTTGTACAGAGTTCTCCACCAAAGGATGTGGAGTCCTACATTCATCGTTCTGGGCGAACAGGCAGAGCCGGAAGGACTGGGATTTGCATCTGCTTTTATCAGCACAAGGAAGAGTATCAGTTAGCCCAGGTGGAGCAGAAAGCGGGAATTAAATTTAAGCGAATAGGTGTTCCTTCTGCAACAGAGATAATAAAAGCTTCTAGCAAAGATGCCATCAGGCTTTTGGATTCTGTGCCTCCCACTGCGATTGGTCACTTCAAGCAGTCAGCCGAGAAGCTGATCGAGGAGAAGGGAGCCGTGGAAGCCCTGGCAGCAGCCCTGGCCCATATTTCAGGTGCCACGTCAGTCGACCAGCGCTCCTTGATCAACTCAGATGTGGGCTTTGTGACCATGATCTTGCAGTGCTCAATTGAAATGCCAAATATTAGTTATGCTTGGAAAGAACTTAAAGAGCAACTGGGTGAGGATATTGATTCCAAAGTGAAGGGAATGGTCTTTCTCAAAGGAAAGCAGGGTGTTTGCTTTGATATCCCTACTGCATCAGTAACAGAAGTACAGGAAAAATGGCACGATTCACGGCGCTGGCAGCTTTCTGTGGCCACAGAGCAACCAGAGCTAGAAGGACCGCGGGAAGGATATCGAAGCTTCAGGGGACAGCGGGAAGGAAACAGAAGCTTCAGGGGACAGCGGGAAGGCAATCGAGGTCTCAGGGGACAGCGGGAAAGAAATAGAAGCTTCAGAGGACAGCGATCAGGAGGTGGCAACAAAAGTAACAGATTCCAAAACAAAGGCCAGAAGCGGAGTTTTAGTAAAGCATTCGGACAGTAA

Related Sequences

bmy_04415T0 SequenceType object (3)

Length: 786 aa      
>bmy_04415T0
MPGKLLSEADLESDTAMAKVEMPRKQNEKKGKKEKPKSNKTEEAAEEKEETISPKAKKVKKKAGPSEADLSSPKSKKAKKKEEPSQDDIISPKTKRAKKSKEPCEKTVVSPKTKKLIKNEEPSEDDLGAPKSKKMKKEKEMNGEIGEKSPNLKNGFPHSGPDSDSKEAASEESNSELEQEITVEQKEGAFSNFPISEETIKLLKARGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLVEKLQGELQDRKRGRAPQVLVLTPTRELASQVSRDFSDVTKKLAVACFYGGTPYGGQIERMRNGIDILVGTPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCVAYKKDSEDNPQTLLFSATCPHWVYNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAVKCHWTQRAAVIGDVIRVYSGYQGRTIIFCETKKEAQELSQNVSIRQDAQSLHGDIPQKQREITLKGFRNGDFGVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGRTGICICFYQHKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAIGHFKQSAEKLIEEKGAVEALAAALAHISGATSVDQRSLINSDVGFVTMILQCSIEMPNISYAWKELKEQLGEDIDSKVKGMVFLKGKQGVCFDIPTASVTEVQEKWHDSRRWQLSVATEQPELEGPREGYRSFRGQREGNRSFRGQREGNRGLRGQRERNRSFRGQRSGGGNKSNRFQNKGQKRSFSKAFGQ*