Part of scaffold_143 (Scaffold)

For more information consult the page for scaffold_143 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TSPAN15 ENSTTRG00000008213 (Bottlenosed dolphin)

Gene Details

tetraspanin 15

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007775, Bottlenosed dolphin)

Protein Percentage 96.97%
cDNA percentage 97.85%
Ka/Ks Ratio 0.21518 (Ka = 0.013, Ks = 0.0606)

TSPAN15 ENSBTAG00000000224 (Cow)

Gene Details

Tetraspanin-15

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000031290, Cow)

Protein Percentage 94.7%
cDNA percentage 94.32%
Ka/Ks Ratio 0.10273 (Ka = 0.0245, Ks = 0.2389)

TSPAN15  (Minke Whale)

Gene Details

tetraspanin 15

External Links

Gene match (Identifier: BACU001942, Minke Whale)

Protein Percentage 96.27%
cDNA percentage 97.23%
Ka/Ks Ratio 0.37137 (Ka = 0.0222, Ks = 0.0598)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 795 bp    Location:1256152..1305774   Strand:+
>bmy_04422
ATGCCCCGCGGAGACTCGGAGCAGGTGCGCTACTGCGCGCGCCTCTCCTATCTCTGGCTCAAGTTCTCGCTCGTCATCTACTCCACGGTGTTCTGGCTGGTCGGGGGCCTGGTCCTGTCAGTGGGGGTCTATGCAGAGGTCGAGAGGCAGAAATACAAAACCCTGGAAAGTGCCTTTCTGGCCCCGGCCATCATCCTCATCCTCCTGGGGGTTGTCATGTTCATCGTGTCCTTCATCGGCGTGCTGGCTTCCCTTCGCGACAACCTGTGCCTTCTCCAAGCGACCATCGACTTTCTGAATGACAACATTCGAAGAGGAATCGAGAACTACTATGACGATCTGGACTTCAAAAACATCATGGACTTTGTTCAGAAGGAGTTTAAGTGCTGTGGCGGAGAAGACTACCGAGATTGGAGCAAAAACCAGTACCACGACTGCAATGCCCCCGGACCCCTGGCCTGCGGGGTGCCCTACACCTGCTGCTTCAGAAACACGACAGCAGTTGTCAACACCATGTGTGGCTACAGAACTATTGACAAGGAGAATGTCATCTACGTGCGGGGCTGCACCAACGCCGTGCTCATCTGGTTCATGGACAACTACACCATCATGGCGGGCCTCCTGCTAGGCATCCTGCTCCCTCAGTTCCTGGGGGTGCTGCTGACATTCCTGTACATCACCCGGGTGGAGGACATCATCATGGAGCACTCTGTCACCGATGGACTCCTGGGCCCCGGCAACAAACCCAGCGTGGAGGCAGCAGGCACGGGGTGCTGCATGTGCTACCCCAATTAG

Related Sequences

bmy_04422T0 Protein

Length: 265 aa      View alignments
>bmy_04422T0
MPRGDSEQVRYCARLSYLWLKFSLVIYSTVFWLVGGLVLSVGVYAEVERQKYKTLESAFLAPAIILILLGVVMFIVSFIGVLASLRDNLCLLQATIDFLNDNIRRGIENYYDDLDFKNIMDFVQKEFKCCGGEDYRDWSKNQYHDCNAPGPLACGVPYTCCFRNTTAVVNTMCGYRTIDKENVIYVRGCTNAVLIWFMDNYTIMAGLLLGILLPQFLGVLLTFLYITRVEDIIMEHSVTDGLLGPGNKPSVEAAGTGCCMCYPN*