Part of scaffold_143 (SequenceType object (1))

For more information consult the page for scaffold_143 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TSPAN15ENSTTRG00000008213 (Bottlenosed dolphin)

Gene Details

tetraspanin 15

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007775, Bottlenosed dolphin)

Protein Percentage 96.97%
cDNA percentage 97.85%
Ka/Ks Ratio 0.21518 (Ka = 0.013, Ks = 0.0606)

TSPAN15ENSBTAG00000000224 (Cow)

Gene Details

Tetraspanin-15

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000031290, Cow)

Protein Percentage 94.7%
cDNA percentage 94.32%
Ka/Ks Ratio 0.10273 (Ka = 0.0245, Ks = 0.2389)

TSPAN15 (Minke Whale)

Gene Details

tetraspanin 15

External Links

Gene match (Identifier: BACU001942, Minke Whale)

Protein Percentage 96.27%
cDNA percentage 97.23%
Ka/Ks Ratio 0.37137 (Ka = 0.0222, Ks = 0.0598)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 795 bp    Location:1256152..1305774   Strand:+
>bmy_04422
ATGCCCCGCGGAGACTCGGAGCAGGTGCGCTACTGCGCGCGCCTCTCCTATCTCTGGCTCAAGTTCTCGCTCGTCATCTACTCCACGGTGTTCTGGCTGGTCGGGGGCCTGGTCCTGTCAGTGGGGGTCTATGCAGAGGTCGAGAGGCAGAAATACAAAACCCTGGAAAGTGCCTTTCTGGCCCCGGCCATCATCCTCATCCTCCTGGGGGTTGTCATGTTCATCGTGTCCTTCATCGGCGTGCTGGCTTCCCTTCGCGACAACCTGTGCCTTCTCCAAGCGACCATCGACTTTCTGAATGACAACATTCGAAGAGGAATCGAGAACTACTATGACGATCTGGACTTCAAAAACATCATGGACTTTGTTCAGAAGGAGTTTAAGTGCTGTGGCGGAGAAGACTACCGAGATTGGAGCAAAAACCAGTACCACGACTGCAATGCCCCCGGACCCCTGGCCTGCGGGGTGCCCTACACCTGCTGCTTCAGAAACACGACAGCAGTTGTCAACACCATGTGTGGCTACAGAACTATTGACAAGGAGAATGTCATCTACGTGCGGGGCTGCACCAACGCCGTGCTCATCTGGTTCATGGACAACTACACCATCATGGCGGGCCTCCTGCTAGGCATCCTGCTCCCTCAGTTCCTGGGGGTGCTGCTGACATTCCTGTACATCACCCGGGTGGAGGACATCATCATGGAGCACTCTGTCACCGATGGACTCCTGGGCCCCGGCAACAAACCCAGCGTGGAGGCAGCAGGCACGGGGTGCTGCATGTGCTACCCCAATTAG

Related Sequences

bmy_04422T0 SequenceType object (3)

Length: 265 aa      View alignments
>bmy_04422T0
MPRGDSEQVRYCARLSYLWLKFSLVIYSTVFWLVGGLVLSVGVYAEVERQKYKTLESAFLAPAIILILLGVVMFIVSFIGVLASLRDNLCLLQATIDFLNDNIRRGIENYYDDLDFKNIMDFVQKEFKCCGGEDYRDWSKNQYHDCNAPGPLACGVPYTCCFRNTTAVVNTMCGYRTIDKENVIYVRGCTNAVLIWFMDNYTIMAGLLLGILLPQFLGVLLTFLYITRVEDIIMEHSVTDGLLGPGNKPSVEAAGTGCCMCYPN*