Part of scaffold_143 (Scaffold)

For more information consult the page for scaffold_143 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SAR1A ENSTTRG00000006648 (Bottlenosed dolphin)

Gene Details

SAR1 homolog A (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006288, Bottlenosed dolphin)

Protein Percentage 79.8%
cDNA percentage 82.15%
Ka/Ks Ratio 0.57288 (Ka = 0.1804, Ks = 0.315)

SAR1A ENSBTAG00000016858 (Cow)

Gene Details

GTP-binding protein SAR1a

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022422, Cow)

Protein Percentage 79.29%
cDNA percentage 79.97%
Ka/Ks Ratio 0.3796 (Ka = 0.1807, Ks = 0.4759)

SAR1A  (Minke Whale)

Gene Details

secretion associated, Ras related GTPase 1A

External Links

Gene match (Identifier: BACU020500, Minke Whale)

Protein Percentage 80.9%
cDNA percentage 83.42%
Ka/Ks Ratio 0.56333 (Ka = 0.1629, Ks = 0.2892)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 798 bp    Location:1821272..1806977   Strand:-
>bmy_04429
ATGTCTTTCATCTTTGAGTGGCTCTACAATGGCTTCAGCAGTGTGCTCCAGTTCCTAGGACTCTACAAGAAATCTGGAAAACTTGTATTCTTGGGTTTGGACAATGCAGGCAAAACCACTCTTCTACACATGCTCAAAGATGACAGATTGGGCCAACATGTTCCAACATTACATCCGACATCAGAAGAGCTGACAATTGCTGGAATGACTTTTACAACTTTTGATCTTGGTGGGCATGAGCAAGCCCGTCGAGTTTGGAAAAATTATCTCCCCGCAATTAATGGGATTGTCTTTCTGGTGGACTGTGCAGATCATCCTCGACTCATGGAATCCAAAGTGGAGCTTAATGCTTTAATGACTGATGAAACAATATCCAACGTGCCAATCCTTATCTTGGGTAACAAAATTGACAGAACAGATGCAATCAGTGAAGAAAAACTCCGGGAATGTGACCCTGAAGGAGCTGAACGCCCGCCCCATGGAAGTGTTCATGTGCAGTGTGCTCAAGAGGCAAGGCTATGGCGAGGGCTTCCGTTGGCTCTCCCAAGACTTCATAAAATTATGCACAGATACACGTTGGAGGCCAGAGCTCAGTCAAATGAACAGCAGGCTGTTGTAAAAAGTGACTTTTGCCTCATGAAAGACTTGAGAACATATCCCTTGTTGTCACACACTGCAGGTAACCCATACTTCTCTATCCAGAGATACGAGAGCAAGCTAGAAAACTGTGGATTCTACACAGGGCAGCTCTTTGTGAAGGTGGTTTATTTTGGCCACTGGAGAAAGAGTCGGGATTGA

Related Sequences

bmy_04429T0 Protein

Length: 266 aa      View alignments
>bmy_04429T0
MSFIFEWLYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLRECDPEGAERPPHGSVHVQCAQEARLWRGLPLALPRLHKIMHRYTLEARAQSNEQQAVVKSDFCLMKDLRTYPLLSHTAGNPYFSIQRYESKLENCGFYTGQLFVKVVYFGHWRKSRD*