Part of scaffold_150 (Scaffold)

For more information consult the page for scaffold_150 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SF3B1 ENSTTRG00000003414 (Bottlenosed dolphin)

Gene Details

splicing factor 3b, subunit 1, 155kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003203, Bottlenosed dolphin)

Protein Percentage 86.17%
cDNA percentage 85.59%
Ka/Ks Ratio 0.04241 (Ka = 0.0013, Ks = 0.0317)

SF3B1 ENSBTAG00000008915 (Cow)

Gene Details

splicing factor 3B subunit 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011734, Cow)

Protein Percentage 99.92%
cDNA percentage 97.22%
Ka/Ks Ratio 0.00286 (Ka = 0.0004, Ks = 0.1245)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3777 bp    Location:290524..328711   Strand:+
>bmy_04439
ATGGCGAAGATCGCGAAGACCCACGAAGATATTGAAGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCTCAAGGAGTGGGCCTTGATTCTACAGGTTATTATGACCAGGAAATTTATGGTGGAAGTGACAGCAGGTTTGCTGGATACGTGACATCTATTGCTGCAACTGAACTTGAAGATGATGACGATGACTACTCATCATCTACAAGTTTGCTTGGTCAGAAGAAGCCAGGATATCATGCCCCTGTGGCATTGCTTAATGATATACCACAGTCAACAGAACAGTATGATCCATTTGCTGAGCACCGACCTCCAAAGATTGCAGATCGGGAAGATGAATACAAAAAGCACAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATCCTTTTGCAGATGGAGGGAAGACCCCTGATCCTAAAATGAATGCTAGGACTTACATGGATGTAATGCGAGAACAACATTTAACTAAAGAAGAGAGAGAAATTAGGCAACAGCTAGCAGAAAAAGCTAAAGCTGGAGAACTAAAAGTCGTCAATGGAGCAGCAGCATCCCAGCCTCCCTCAAAACGAAAGCGGCGTTGGGATCAAACAGCTGATCAGACTCCTGGTGCCACTCCAAAAAAGCTGTCAAGTTGGGATCAAGCAGAGACCCCTGGACATACCCCTTCCTTAAGATGGGATGAGACACCAGGTCGTGCAAAAGGAAGTGAGACTCCTGGAGCAACCCCAGGCTCAAAAATATGGGATCCTACACCTAGTCACACACCTGCGGGAGCTGCTACCCCTGGACGAGGCGATACACCAGGCCACGCGACACCAGGCCATGGAGGCGCAACTTCCAGTGCTCGTAAAAACAGATGGGATGAGACCCCCAAAACAGAAAGAGATACTCCTGGACATGGAAGTGGATGGGCTGAGACTCCTCGAACAGATCGAGGTGGAGATTCCATTGGTGAAACACCAACTCCTGGAGCCAGTAAAAGAAAATCACGTTGGGATGAAACACCAGCTAGTCAGATGGGTGGAAGCACTCCTGTTCTGACCCCTGGAAAGACACCAATTGGCACGCCAGCCATGAACATGGCTACCCCTACTCCAGCTGGATATGTTCCTATTCGAACTCCAGCTCGAAAGCTGACAGCAACTCCAACACCTTTGGGTGGTATGACAGGTTTCCACATGCAAACTGAAGATAGAACTATGAAAAGTGTTAATGACCAACCATCTGGAAATCTTCCATTTTTAAAACCTGATGATATTCAGTACTTTGATAAACTTTTGGTTGATGTTGATGAATCAACACTTAGTCCAGAAGAGCAAAAAGAGAGAAAAATAATGAAGTTGCTTTTAAAAATTAAGAATGGAACACCTCCAATGAGAAAAGCTGCATTGCGTCAGATTACTGATAAAGCTCGGGAATTTGGAGCTGGTCCTTTGTTTAATCAGATTCTTCCTCTGCTGATGTCGCCTACACTTGAGGATCAAGAGCGTCATTTGCTTGTAAAAGTTATTGATAGAATATTATACAAACTTGATGACTTAGTTCGACCATATGTGCACAAGATTCTAGTGGTCATTGAACCATTGTTGATTGATGAGGATTACTATGCTAGAGTGGAAGGCCGAGAGATTATTTCTAATTTGGCAAAGGCTGCTGGTCTGGCTACTATGATCTCTACCATGAGACCTGATATAGATAACATGGATGAGTATGTCCGTAACACAACAGCTAGAGCTTTTGCTGTGGTAGCCTCTGCCCTGGGCATTCCTTCATTATTGCCTTTCTTAAAAGCTGTGTGCAAAAGCAAGAAGTCCTGGCAAGCAAGACACACTGGTATAAAAATTGTACAGCAAATAGCTATTCTCATGGGCTGTGCCATCTTGCCACATCTCAGAAGTTTAGTTGAAATCATTGAACATGGTCTTGTGGATGAGCAGCAGAAAGTTCGGACCATTAGTGCTTTGGCCATTGCTGCCTTGGCTGAAGCAGCAACTCCTTATGGTATCGAATCTTTTGATTCTGTGTTAAAGCCTCTATGGAAGGGTATCCGCCAACACAGAGGAAAGGGTCTGGCCGCTTTCTTAAAGGCTATTGGGTATCTTATTCCTCTCATGGATGCAGAATATGCCAACTACTATACTAGAGAAGTGATGTTAATTCTTATTCGAGAATTCCAATCTCCTGATGAAGAAATGAAGAAAATTGTGCTGAAGGTGGTAAAGCAGTGTTGTGGAACAGATGGTGTAGAAGCAAACTACATTAAAACAGAGATCCTTCCTCCTTTTTTTAAACACTTCTGGCAACACAGAATGGCTTTGGATAGAAGAAATTACCGGCAGTTAGTTGATACTACTGTGGAGTTGGCAAACAAAGTAGGTGCAGCAGAAATTATATCCAGGATTGTGGATGATCTGAAAGATGAAGCTGAACAGTACAGAAAAATGGTGATGGAGACAATTGAGAAAATTATGGGCAACTTGGGAGCAGCAGATATTGATCATAAACTTGAAGAACAGCTGATTGATGGTATTCTTTATGCTTTTCAAGAACAGACTACAGAGGACTCAGTAATGTTGAACGGCTTTGGCACAGTGGTCAACGCTCTTGGCAAACGAGTCAAACCGTACTTGCCTCAGATCTGTGGTACAGTTTTGTGGCGTTTAAATAACAAATCAGCAAAAGTTAGGCAACAGGCAGCTGACTTGATCTCTCGAACGGCTGTTGTCATGAAGACTTGTCAAGAGGAAAAATTGATGGGGCACTTGGGTGTTGTTTTGTATGAGTATTTGGGCGAAGAGTACCCTGAAGTATTGGGCAGCATTCTTGGAGCACTGAAGGCCATTGTAAATGTAATAGGTATGCATAAGATGACTCCACCAATTAAAGATCTGCTGCCTAGACTCACCCCCATCTTAAAGAATAGGCATGAAAAAGTACAAGAGAATTGTATTGATCTTGTTGGACGTATTGCTGATAGGGGAGCTGAATATGTGTCTGCAAGAGAATGGATGAGGATTTGCTTTGAGCTTTTAGAGCTCTTAAAAGCTCACAAAAAAGCTATTCGTAGAGCCACAGTCAACACATTTGGTTATATTGCAAAGGCCATTGGCCCTCATGATGTATTGGCTACACTTTTAAACAACCTCAAAGTTCAGGAAAGGCAGAACAGAGTTTGTACCACTGTAGCAATAGCTATTGTTGCTGAAACATGTTCACCCTTCACAGTACTACCTGCCTTAATGAATGAATACAGAGTTCCTGAACTGAATGTTCAAAATGGAGTGTTAAAATCACTTTCCTTCTTGTTTGAATATATTGGTGAAATGGGAAAGGACTACATTTATGCTGTAACACCACTCCTTGAAGATGCTTTAATGGATAGGGACCTTGTACACAGACAGACGGCTAGTGCAGTGGTGCAACACATGTCACTTGGGGTTTATGGATTTGGTTGTGAAGATTCACTGAATCACTTGTTGAACTATGTATGGCCCAATGTGTTTGAGACATCTCCCCATGTAATTCAGGCAGTTATGGGGGCCCTGGAGGGTCTGAGAGTTGCTATTGGACCATGTAGAATGCTGCAGTATTGTTTACAGGGTTTGTTTCACCCAGCCCGGAAAGTCAGAGATGTGTATTGGAAAATTTACAACTCCATCTACATTGGTTCACAGGATGCTCTCATAGCACATTACCCAAGAATCTACAATGATGATAAGAACACCTATATTCGTTATGAACTTGACTATATCTTGTAA

Related Sequences

bmy_04439T0 Protein

Length: 1259 aa      View alignments
>bmy_04439T0
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAATELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYKKHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAKGSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTERDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPIGTPAMNMATPTPAGYVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVDVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL*