Sequence detailsbmy_04448 (Coding sequence)

Part of scaffold_150 (SequenceType object (1))

For more information consult the page for scaffold_150 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GTF3C3ENSTTRG00000003409 (Bottlenosed dolphin)

Gene Details

general transcription factor IIIC, polypeptide 3, 102kDa

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003196, Bottlenosed dolphin)

Protein Percentage 82.92%
cDNA percentage 84.22%
Ka/Ks Ratio 0.52069 (Ka = 0.0312, Ks = 0.0599)

GTF3C3ENSBTAG00000007779 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000010228, Cow)

Protein Percentage 93.23%
cDNA percentage 92.95%
Ka/Ks Ratio 0.21479 (Ka = 0.0397, Ks = 0.1847)

GTF3C3 (Minke Whale)

Gene Details

general transcription factor IIIC, polypeptide 3, 102kDa

External Links

Gene match (Identifier: BACU014104, Minke Whale)

Protein Percentage 97.4%
cDNA percentage 97.49%
Ka/Ks Ratio 0.33301 (Ka = 0.0178, Ks = 0.0535)

Additional orthologs identified in other species via the OPTIC pipeline.

GTF3C3 (Human)   Gtf3c3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2679 bp    Location:863647..893589   Strand:+
Raw sequence 
>bmy_04448
TCCCGGAAGGACTACGGGTCCTTGTTTTTAGCGCCTCGGCGTGGGGGTAGCGTCTGGGAGCCTCTGCTCTTCCGTTTCTCTGTCTCGGTTCCTGGAAGTGCACATCAGAACCCCGCAAACATGTCGGGGTTCAGCCCGGAGCTTATCGACTATCTGGAAGGGAAGATCTCCTTTGAGGAGTTCGAAAGGCGGAGAGAAGACAGAAAAACCCGTGAGAAGAAAAGTCTTCAGGAAAAAGGAAAGTCATCAGCTGAAGAAAATCCAAATGACTCTGCAGTTCCATCATCATCAGGAATTGACTCTACCAAATCTCAGGACAACGATGTCAATGAAGGAGAAACATCAGATGGAGTCAGTAAGTCAGTTCACAAGGTCTTTGCTTCCATGCTTGGAGAGAATGAAGATGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGACACCTGAGCAACCCACTGCAGGCGACGTGTTTGTATTAGAGATGGTTCTCAATCGTGAAACCAAGAAAATGATGAAAGAGAAAAGGCCTCGGAGTAAACTTCCCAGAGCTCTGAGAGGTCTCATGGGTGAAGCCAACATTCGCTTTGCTCGAGGAGAACGTGAAGAGGCGATATTGATGTGCATGGAAATCATAAGACAAGCTCCTTTGGCTTATGAGCCATTTTCTACTCTTGCTATGATATATGAGGACCAAGGTGACATGGAGAAATCACTGCAGTTTGAGTTGATTGCTGCACATTTAAATCCCAGTGACACTGAAGAATGGGTTAGATTGGCAGAAATGTCCCTGGAACAAGACAATATTAAGCAGGCTATTTTTTGCTACACAAAAGCACTTAAATATGAACCTACTAATGTCCGTTATCTGTGGGAGCGATCAAGCCTTTATGAACAGATGGGAGATCACAAAATGGCAATGGATGGTTATAGGCGTATTTTAAACCTTTTATCTCCGTCTGATGGAGAACGATTTATGCAATTGGCTAGAGATATGGCAAAGAGTTACTATGAAGCCAATGATGTTATTTCAGCTATTAACATAATTGAAGAAGCTTTCTCAAAGCACCAGGGCCTAGTCTCCATGGAAGATGTTAACATTGCAGCTGAACTATACATTTCTAATAAACAATATGACAGAGCTTTGGAGGTGATTACAGATTTTTCTGGAATTGTGCTAGAAAAAAAAGCTACAGAAGAAGGCACTTCAGAAGAGAATAAAAGTTGTAGTTTCCTGTGCATAGGAGAGTCTGGTGAGAATGTTTCCTGCACTATACCGGATGGTGTGCCAATAGATATCACAGTGAAGTTGATGGTCTGCCTTGTACATCTCAACATCCTTGAACCACTTAATCCTCTCTTGACAACACTCGTGGAACAGAATCCCGAAGACATGGGAGACCTCTATCTCGATGTTGCTGAAGCTTTTCTGGATGTTGGTGAATATAATTCTGCACTTCCCCTCCTTAGTGCGCTAGTCTGCTCTGAAAGATATAACCTCGCAGTGGTTTGGCTTCGGCATGCAGAATGCTTAAAGGCCTTAGGCTATATGGAGCGTGCTGCCGAAAGCTATGGCAAAGTGGTTGATCTGGCCCCCCTCCATTTGGATGCAAGAATTTCACTTTCCACCCTTCAGCAGCAGCTGGGCCGTCCTGAGAAAGCTCTGGAAGCTCTGGAACCCATGTATGATCCAGATACTTTAGCACAAGATGCAAACGCAGCACAGCAGGAACTGAAGTTGCTGCTTCAACGTTCTACTCTATTGTTTTCACAAGGCAAAATGTATGGTTATGTGGATACCTTGCTTACCATGTTAGCCATGCTTTTAAGGGTAGCAATGAATAGAGCCCAAGTCTGTTTGATATCTAGTTCCAAATCTGGAGAGAGGCATCTCTACCTTATTAAAGTGTCAAGAGACAAAATATCAGACAACAATGACCAAGAGTCAGCAAATTGTGATGCAAAAGCAATATTTGCCGTACTCACGAGTGTTTTGACAAAAGATGACTGGTGGAACCTTCTTTTGAAGGCCATATACTCCTTATGTGACCTATCCCGATTTCAGGAGGCTGAGTTACTTGTGGATTCTTCATTGGAATATTATTCATTTTATGAGGACAGGCCAAAACGCAAAGAGCTAGAATACTTTGGTCTCTCTGCTGCAATTCTGGACAAAAATTTCAGAAAGGCATATAACTATATCAGAGTAAGTGTTGAAGAAATAAGGAACTATGTTTTTGTCCCACCATCTGACATCACTGTTCATTTTTCAGGACAGTATGTGCAGGCCTTTCGCACCCATCCCCATGAACCTCTCTATAGCCTCTGTATAGGCCTAACCTTTATTCACATGGCATCTCAGAAGTATGTATTAAGGAGACATGCTCTTATTGTGCAGGGCTTTTCCTTTCTTAATCGATACCTCAGTCTACGTGGGCCTTGCCAGGAATCATTCTACAATTTGGGCCGTGGCCTTCACCAACTGGGGCTGATTCACCTTGCAATCCACTATTATCAGAAGGCCCTGGAGCTCCCTCCATTCGTGGTAGAGGGTATGGAAGTTGACCAGTTAGACTTACGAAGAGATATTGCCTACAATTTGTCTCTCATATATCAGAACAGCGGGAATATTGGAATGGCTCAGAAGCTTTTATATACTTATTGTTCTATATAA

Related Sequences

bmy_04448T0 SequenceType object (3)

Length: 893 aa      View alignments
>bmy_04448T0
SRKDYGSLFLAPRRGGSVWEPLLFRFSVSVPGSAHQNPANMSGFSPELIDYLEGKISFEEFERRREDRKTREKKSLQEKGKSSAEENPNDSAVPSSSGIDSTKSQDNDVNEGETSDGVSKSVHKVFASMLGENEDEEEEEEEEEEEEEETPEQPTAGDVFVLEMVLNRETKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVRYLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVISAINIIEEAFSKHQGLVSMEDVNIAAELYISNKQYDRALEVITDFSGIVLEKKATEEGTSEENKSCSFLCIGESGENVSCTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLDARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAAQQELKLLLQRSTLLFSQGKMYGYVDTLLTMLAMLLRVAMNRAQVCLISSSKSGERHLYLIKVSRDKISDNNDQESANCDAKAIFAVLTSVLTKDDWWNLLLKAIYSLCDLSRFQEAELLVDSSLEYYSFYEDRPKRKELEYFGLSAAILDKNFRKAYNYIRVSVEEIRNYVFVPPSDITVHFSGQYVQAFRTHPHEPLYSLCIGLTFIHMASQKYVLRRHALIVQGFSFLNRYLSLRGPCQESFYNLGRGLHQLGLIHLAIHYYQKALELPPFVVEGMEVDQLDLRRDIAYNLSLIYQNSGNIGMAQKLLYTYCSI*