Part of scaffold_147 (Scaffold)

For more information consult the page for scaffold_147 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DENND5B ENSBTAG00000020315 (Cow)

Gene Details

DENN domain-containing protein 5B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027075, Cow)

Protein Percentage 71.11%
cDNA percentage 67.47%
Ka/Ks Ratio 0.03208 (Ka = 0.1862, Ks = 5.8043)

DENND5B  (Minke Whale)

Gene Details

DENN/MADD domain containing 5B

External Links

Gene match (Identifier: BACU006097, Minke Whale)

Protein Percentage 70.95%
cDNA percentage 67.42%
Ka/Ks Ratio 0.03114 (Ka = 0.1884, Ks = 6.0507)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1881 bp    Location:488372..460871   Strand:-
>bmy_04485
ATGAAGATTGGACAAGGGAAGTATGAACCAGGCTTCTTCCCTAAGCTGCAGTCTGATGTGCTTTCCACCGGGCCAGCCAGCAACAAGAATGCCCCTGCCCAGTGGAGGCGTAAAGACCGGCAGAAGCAGCACACAGAACACCTGCGTTTAGACAATGACCAGAGAGAGAAGTACATCCAGGAAGCCAGGAATATGGGCAGCACCATCCGCCAGCCCAAACTGTCTAACCTTTCCCCGTCAGTGATTGCCCAAACCAACTGGAAGTTTGTGGAGGGTCTGCTGAAGGAATGCCGCAACAAGACCAAGAGGATGCTGGTGGAGAAGATGGGCCGAGAGGCTGTGGAGCTAGGGCACGGGGAGGTGAACATCACAGGGGTGGAAGAGAACACCTTGATTGCCAGCCTTTGTGACCTCCTGGAAAGGATTTGGAGTCATGGGCTACAAGTGAAACAGGGGAAATCAGCCTTGTGGTCCCACCTGTTACATTATCAGGAAAACCGGCAGAGAAAACTCACATCAGGAAGCCTCAGTACCTCAGGAATATTTCTTGATTCAGAACGGAGGAAGTCTGATGCCAGCTCAGTCATGCCTCCCCTGAGAATCTCCCTCATTCAGGATATGAGGCACATCCAGAACATTGGGGAAATCAAGACTGATGTGGGAAAAGCCAGAGCATGGGTGCGACTGTCCATGGAAAAAAAGTTACTTTCCAGACACCTGAAGCAGCTTCTCTCAGACCATGAGCTCACCAAAAAGTTGTACAAGCGCTATGCCTTCCTGCGCTGTGATGATGAGAAGGAGCAGTTCCTCTATCACCTCCTCTCTTTCAATGCCGTCGATTACTTCTGCTTCACGAATGTCTTCACAACTATCCTGATTCCTTACCACATCCTGATCGTACCAAGCAAGAAGCTGGGGGGCTCCATGTTCACCGCCAACCCATGGATCTGCATCTCGGGAGAACTGGGTGAGACACAGATCCTGCAGATTCCCAGGAATGTGTTAGAGATGACCTTCGAGTACCAGAACTTGGGGAAGCTCACTACGGTGCAGATAGGCCATGATAACTCTGGGCTGTATGCCAAATGGCTTGTTGAGTATGTGATGGTCAGGAATGAGATCACCGGACATACCTACAAGTTCCCGTGTGGCCGGTGGTTGGGGAAGGGCATGGATGACGGAAGCCTGGAGCGGGTCCTAGTCGGGGACCTGCTCACATCCCAGCCTGAGGTGGACGAGAGGCCGTGCCGGACCCCGCCCCTGCAGCAGTCTCCCAGCGTCATCCGGAGGCTCGTTACCATCTCACCCAACAACAAGCCCAAGCTGAACACTGGGCAGATCCAGGAGTCCATCGGTGAGGCAGTCAATGGCATCGTGAAGCACTTCCATAAGCCTGAGAAAGAGCGAGGCAGTCTGACGCTGTTGCTTTGTGGAGAATGTGGCCTTGTCTCGGCCCTGGAACAGGCTTTCCAGCATGGATTTAAATCGCCGCGGCTCTTCAAAAATGTCTTCATTTGGGATTTCTTGGAAAAAGCACAAACCTATTACGAGACTTTGGAGCAGAATGAACTTGTTCCTGAGGAAAACTGGCATATGAGGGCCCGGAACTTCTGCCGTTTTGTCACTGCGATCAACAATAATCCCCGGAACATTGGCAAGGATGGCAAGTTTCAGATGCTGGTGTGCTTGGGAGCCAGAGATCACCTCCTGCACCACTGGATTGCCCTGCTGGCTGACTGCCCCATCACCGCACACATGTATGAGGATGTGGCGCTGATCAAAGACCACACACTTGTCAATTCCTTGATCCGCGTGCTGCAGACACTGCAGGAGTTCAACATCACGCTGGAGACATCCCTGGTCAAGGGCATCGACATCTGA

Related Sequences

bmy_04485T0 Protein

Length: 627 aa      View alignments
>bmy_04485T0
MKIGQGKYEPGFFPKLQSDVLSTGPASNKNAPAQWRRKDRQKQHTEHLRLDNDQREKYIQEARNMGSTIRQPKLSNLSPSVIAQTNWKFVEGLLKECRNKTKRMLVEKMGREAVELGHGEVNITGVEENTLIASLCDLLERIWSHGLQVKQGKSALWSHLLHYQENRQRKLTSGSLSTSGIFLDSERRKSDASSVMPPLRISLIQDMRHIQNIGEIKTDVGKARAWVRLSMEKKLLSRHLKQLLSDHELTKKLYKRYAFLRCDDEKEQFLYHLLSFNAVDYFCFTNVFTTILIPYHILIVPSKKLGGSMFTANPWICISGELGETQILQIPRNVLEMTFEYQNLGKLTTVQIGHDNSGLYAKWLVEYVMVRNEITGHTYKFPCGRWLGKGMDDGSLERVLVGDLLTSQPEVDERPCRTPPLQQSPSVIRRLVTISPNNKPKLNTGQIQESIGEAVNGIVKHFHKPEKERGSLTLLLCGECGLVSALEQAFQHGFKSPRLFKNVFIWDFLEKAQTYYETLEQNELVPEENWHMRARNFCRFVTAINNNPRNIGKDGKFQMLVCLGARDHLLHHWIALLADCPITAHMYEDVALIKDHTLVNSLIRVLQTLQEFNITLETSLVKGIDI*