Part of scaffold_147 (Scaffold)

For more information consult the page for scaffold_147 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LYVE1 ENSTTRG00000003804 (Bottlenosed dolphin)

Gene Details

lymphatic vessel endothelial hyaluronan receptor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003571, Bottlenosed dolphin)

Protein Percentage 95.48%
cDNA percentage 96.77%
Ka/Ks Ratio 0.43159 (Ka = 0.0237, Ks = 0.0548)

LYVE1 ENSBTAG00000000802 (Cow)

Gene Details

Lymphatic vessel endothelial hyaluronic acid receptor 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001061, Cow)

Protein Percentage 84.35%
cDNA percentage 90.2%
Ka/Ks Ratio 0.46632 (Ka = 0.0834, Ks = 0.1789)

LYVE1  (Minke Whale)

Gene Details

lymphatic vessel endothelial hyaluronan receptor 1

External Links

Gene match (Identifier: BACU005658, Minke Whale)

Protein Percentage 96.76%
cDNA percentage 97.72%
Ka/Ks Ratio 0.41249 (Ka = 0.0158, Ks = 0.0384)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 942 bp    Location:1724372..1710353   Strand:-
>bmy_04501
ATGGCCAAGTACTTCAGCCTGGTGTTGCTTCTTGCCTCCATCTGGACCACAAGGCTCCTGGTCCAAGGCTCTCTCCGCACAGAAGAGCTTTCCATCTCAGGACCATGCAGAATCATGGGGGTCACTCTTGTGAACAAAAGGACACACCCGCAGCTGAATTTCACAGAAGCCCAGGAGGCCTGTAGGCTCGTAGGACTAACTCTGGCCAGCAAAGAACAGGTTGAAGCAGCRTGGAAATTTGGCTTTGAGACTTGCAGCTATGGATGGGTTAAAAATCAGTTCGTGGTCATCCCTCGGATTATCCAGAACCCCAAGTGTGGGAAGAATGGGGTGGGCGTTCTGATTTGGAGAAGTTCACTCAACCAACAGCACAGGGCCTATTGTCACAACTCATCTGAAATTATCACCACCGATGATCCCATATTCAACACGGAAACTGCAACATACACAACAGAAATGATTGCCAGTGAGAGTACACACTCAGCGTTGTCTACTGATGGACCTGACTCTATTACACCCACTGTGGCTCCTGCTCTGGCTTCCACTTCTATTCCACGGAAAAGAAAATTAATTTGCATAACGGAAGCTTTTATGGAAACGAGCACCATTTCTACAGAAACTGAATCGTATATTGAAAATAAAGTGGCATTCAAGAATGAACCTGTTGGGTTTGGAGGTGTTCCCACGACCCTGCTGGTGCTTGCGCTCCTCTTCTTTGCTGCTGCAGCTGGCCTCGCGGTTTGCTACGTCAAAAGGTATGTGAAGGCCTTCCCTTTTACAAACAAGAACCAGCAGAAGGAAATGATAGAAACTAAAGTAGTGAAGGAGGAGAAGGCCGATGATAACAACCCTAATGAGGAATCAAAGAATACGGATAAAAAACCCGAGGAGCCCAAGAGTCAACCCAAAACCACAGTGCGATGCCTGGAAGCTGAAGTTTAG

Related Sequences

bmy_04501T0 Protein

Length: 314 aa      View alignments
>bmy_04501T0
MAKYFSLVLLLASIWTTRLLVQGSLRTEELSISGPCRIMGVTLVNKRTHPQLNFTEAQEACRLVGLTLASKEQVEAAWKFGFETCSYGWVKNQFVVIPRIIQNPKCGKNGVGVLIWRSSLNQQHRAYCHNSSEIITTDDPIFNTETATYTTEMIASESTHSALSTDGPDSITPTVAPALASTSIPRKRKLICITEAFMETSTISTETESYIENKVAFKNEPVGFGGVPTTLLVLALLFFAAAAGLAVCYVKRYVKAFPFTNKNQQKEMIETKVVKEEKADDNNPNEESKNTDKKPEEPKSQPKTTVRCLEAEV*