Part of scaffold_153 (Scaffold)

For more information consult the page for scaffold_153 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ERGIC1 ENSTTRG00000010620 (Bottlenosed dolphin)

Gene Details

endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010066, Bottlenosed dolphin)

Protein Percentage 91.76%
cDNA percentage 92.95%
Ka/Ks Ratio 0.26295 (Ka = 0.0534, Ks = 0.2032)

ERGIC1 ENSBTAG00000015955 (Cow)

Gene Details

endoplasmic reticulum-Golgi intermediate compartment protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021218, Cow)

Protein Percentage 96.86%
cDNA percentage 93.86%
Ka/Ks Ratio 0.03995 (Ka = 0.016, Ks = 0.4003)

ERGIC1  (Minke Whale)

Gene Details

endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1

External Links

Gene match (Identifier: BACU014016, Minke Whale)

Protein Percentage 92.44%
cDNA percentage 93.04%
Ka/Ks Ratio 0.26572 (Ka = 0.0541, Ks = 0.2035)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 840 bp    Location:1302351..1378723   Strand:+
>bmy_04518
ATGGAGACTTCATTATGGCATCCAGATGGCACAAATGAGTACATGTTTGCAGAAAGGCCCGGTGATGGTGACGGCAGTTCTAAGGCACGGAGGTTTGACATCTACAGGAAGGTGCCCAAGGACCTCACACAGCCGACGTACACCGGGGCCATTATCTCTATCTGCTGCTGCCTCTTCATCCTCTTCCTCTTCCTCTCGGAGCTCACCGGATTCATAACGACAGAAATTGTGAACGAGTTGTACGTCGATGACCCGGACAAGGACAGCGGGGGCAAAATTGACGTCAGCCTGAACATCAGTCTACCCAATTTGCACTGTGAATTGGTCGGGCTCGACATCCAGGATGAGATGGGCAGGCACGAAGTGGGGCACATTGACAACTCGATGAGGATCCCRCTGAACAATGGGGTGGGCTGCCGCTTCGAGGGACAGTTCAGCATCAACAAGGTCCAGAACGTCCACGGAGCTTTCAACGCTCTCGGGGGAGCAGACAGACTCACCTCCAACCCCCTCGCCTCCCACGACTACATCTTGAAGATCGTGCCCACGGTTTACGAGGACAAGAGTGGCAAGCAACGGTACTCTTATCAGTACACGGTGGCCAACAAGGAGTACGTCGCCTACAGCCACACTGGCCGCATCATCCCCGCCATCTGGTTCCGCTATGACCTAAGCCCCATCACGGTCAAGTACACGGAGAGACGGCAGCCTCTGTACAGGTTCATCACCACGATCTGTGCCATCATCGGCGGGACCTTCACTGTTGCCGGCATTCTGGACTCGTGTATCTTCACAGCCTCGGAGGCCTGGAAGAAGATCCAGCTGGGCAAGATGCATTGA

Related Sequences

bmy_04518T0 Protein

Length: 280 aa      View alignments
>bmy_04518T0
METSLWHPDGTNEYMFAERPGDGDGSSKARRFDIYRKVPKDLTQPTYTGAIISICCCLFILFLFLSELTGFITTEIVNELYVDDPDKDSGGKIDVSLNISLPNLHCELVGLDIQDEMGRHEVGHIDNSMRIPLNNGVGCRFEGQFSINKVQNVHGAFNALGGADRLTSNPLASHDYILKIVPTVYEDKSGKQRYSYQYTVANKEYVAYSHTGRIIPAIWFRYDLSPITVKYTERRQPLYRFITTICAIIGGTFTVAGILDSCIFTASEAWKKIQLGKMH*