Sequence details bmy_04529 (Coding sequence)

Part of scaffold_157 (Scaffold)

For more information consult the page for scaffold_157 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

C1QC ENSBTAG00000011193 (Cow)

Gene Details

complement C1q subcomponent subunit C precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014865, Cow)

Protein Percentage 80.29%
cDNA percentage 84.06%
Ka/Ks Ratio 0.24434 (Ka = 0.118, Ks = 0.4828)

C1QC  (Minke Whale)

Gene Details

complement component 1, q subcomponent, C chain

External Links

Gene match (Identifier: BACU005757, Minke Whale)

Protein Percentage 97.14%
cDNA percentage 97.82%
Ka/Ks Ratio 0.2356 (Ka = 0.0128, Ks = 0.0542)

Additional orthologs identified in other species via the OPTIC pipeline.

C1QC (Human)   C1qc (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1452 bp    Location:348958..360376   Strand:+
Raw sequence 
>bmy_04529
ATGGAAGCCCCCTGGGGCTGGCTGGTGATCGGTGTGCTGGCCATATCCCTGGCCTCTTCGGTGACCCAGGACGTTTGCCGAGCACAGGATGGGAGGGACGGGGCCGCAGGAAGACCCGGCCGACCGGGACGGCCAGGCCTCAAGGGGGAGCGAGGGGAGCAGGGGGCCCCTGGTATCCGGACAGGCGTCCGTGGCCTTAAAGGAGACCAAGGAGAGCCTGGGCCCCCTGGAAAACCTGGCAGAATGGGCTACCCAGGGCCCAGCGGCCCCCTGGGGCCCCCTGGCCTCCCAGGGTTGAAGGGCATCAAGGGCAACCCAGGAAACGTCCAGGACCAGCTGCAGCCAGCCTTCTCGGCCGTGAGACGGAACCCTCCGATGGGCGGCAATGTGGTCATCTTTGACACGGTCATCACCAACCAGGAGAGCCCATACCAGAGCCACTCGGGCCGGTTCATCTGCACTGTGCCGGGTTACTACTACTTCACCTTCCAGGTGGTGTCCAAGTGGGACATCTGCCTGTCCATCGTGTCCTTTGGGAGGGGCCAAGTCCAGCATTCCTTGGGCTTCTGTGACACCAACAGCAAAGGACTCTTCCAGGTGGTGTCCGGCGGTACGGTGTTCCAGCTCCAGCAGGGAGACCAGGTCTGGATTGAAAAAGACCCCAATAAGGGCCGCATTTACCAGGGTTCAGAGGCCGACAGCCTCCTTCCCCAAATGGACATGGGGTCCAGCTCCTGGCCCCACCTTGTACCAAACCTGCTGCTGCTCTTGCTGGCACTGCCGCCTGGGGGCCAAGCCGGCACAGACTGCTATGGGATCGCCGGGATGCCGGGCCTGCCCGGGGCCCCAGGGAAGGATGGGCATGACGGATTGCCAGGGCCCAAGGGTGAACCAGGAATCCCAGCTATCCCTGGGACACGCGGACCCAAGGGTCAGAAGGGAGATCCTGGCACACCTGGCTATCCGGGGAAAAATGGTCCCATGGGAACCCCTGGGATTCCAGGGGCTCCCGGCAACATGGGACCCCCTGGGAACCCGGGCGATGAGGGCAGGTACAAGCAGAATCACCAGTCAGTATTCACTGTCACACGGCAGACAGTCCAGTTCCCGGAGCCCAACAGCCTGGTCAAGTTCAACTCGGTCATCACAAACCCGCAGGGGGATTACGACACGAACACTGGCAAGTTCACCTGCAAAGTTCCCGGCATCTACTACTTTGTCTACTACACGTCACACACGGCCAACCTATGTGTGCAGCTGTACCGCAGCGGTGTCAAGGTGACCACCTTCTGTGACCACATGTCCAACAGCAAGCAGGTCAGCTCAGGCGGTGTGCTGCTGCGGATGCAGGTGGGCGAGCAGGTGTGGCTGGTGGTCAACGACTACAACGGCATGGTGGGCACTGAGGGCTCCGACAGCGTCTTCTCCGGCTTCCTGCTCTTCCCTGACTAG

Related Sequences

bmy_04529T0 Protein

Length: 484 aa      View alignments
>bmy_04529T0
MEAPWGWLVIGVLAISLASSVTQDVCRAQDGRDGAAGRPGRPGRPGLKGERGEQGAPGIRTGVRGLKGDQGEPGPPGKPGRMGYPGPSGPLGPPGLPGLKGIKGNPGNVQDQLQPAFSAVRRNPPMGGNVVIFDTVITNQESPYQSHSGRFICTVPGYYYFTFQVVSKWDICLSIVSFGRGQVQHSLGFCDTNSKGLFQVVSGGTVFQLQQGDQVWIEKDPNKGRIYQGSEADSLLPQMDMGSSSWPHLVPNLLLLLLALPPGGQAGTDCYGIAGMPGLPGAPGKDGHDGLPGPKGEPGIPAIPGTRGPKGQKGDPGTPGYPGKNGPMGTPGIPGAPGNMGPPGNPGDEGRYKQNHQSVFTVTRQTVQFPEPNSLVKFNSVITNPQGDYDTNTGKFTCKVPGIYYFVYYTSHTANLCVQLYRSGVKVTTFCDHMSNSKQVSSGGVLLRMQVGEQVWLVVNDYNGMVGTEGSDSVFSGFLLFPD*