Part of scaffold_157 (Scaffold)

For more information consult the page for scaffold_157 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

C1QB ENSTTRG00000002652 (Bottlenosed dolphin)

Gene Details

complement component 1, q subcomponent, B chain

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002481, Bottlenosed dolphin)

Protein Percentage 92.02%
cDNA percentage 94.68%
Ka/Ks Ratio 0.36548 (Ka = 0.0415, Ks = 0.1135)

C1QB ENSBTAG00000011196 (Cow)

Gene Details

Complement C1q subcomponent subunit B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014871, Cow)

Protein Percentage 75.21%
cDNA percentage 82.48%
Ka/Ks Ratio 0.34197 (Ka = 0.1575, Ks = 0.4606)

C1QB  (Minke Whale)

Gene Details

complement component 1, q subcomponent, B chain

External Links

Gene match (Identifier: BACU005759, Minke Whale)

Protein Percentage 95.98%
cDNA percentage 96.43%
Ka/Ks Ratio 0.28299 (Ka = 0.0242, Ks = 0.0855)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 717 bp    Location:366535..384761   Strand:+
>bmy_04531
ATGAAGACCCCGCGGGGCGGCGCCCCAGTGCTGCTGCCGCTGATGCTCCTGAGTCTGCTCCACGCCTCCCGGGCCCAGAGTGGCTGCACTGGGCACCCGGCCATCCCTGGCATCCCAGGCATCCCTGGGACACCGGGCTCCGACGGCAAACCAGGGACTCCAGGGATAAAGGGAGAGAAAGGGCTGCCGGGGCTAGCTGGAGACCACGGTGAGCTTGGAGAGAAGGGGGACCCAGGGTTTCCTGGGATTCCGGGAAAAGTYGGCCCCAAGGGCCCCGTTGGCCCCAAAGGTGCCCCAGGGCCTCCCGGAGTCCATGGCCCCAAGGGTGAATCAGGAGACTACAAGGCCACGCAGAAAATCGCCTTCTCGGCCACACGCACCATCAACAGCCCCCTGAGGCGGGACCAGGTCATCCGCTTCGACCACATGATCACCAACACCAACAACAACTACGAGTATCGAAACGGCAAGTTCACGTGCAGGGTGCCCGGCCTCTACTACTTCACCTACCACGCCAGCTCTCGAGGGAACCTGTGCATAAACCTCATGCGGGGCCGGGAGCAGACACAGAAAGTGCTCACCTTCTGCGACTATGTCTACAACACCTTCCAGGTGACCACGGGCAGCGTCGTGCTCAAGCTGGAGCTGGGGGAGACCGTCTTCCTGCAGGCCACTGACAAGAACGCCCTGGACAAGGCCAAGTGTGACCTGGAATAG

Related Sequences

bmy_04531T0 Protein

Length: 239 aa      View alignments
>bmy_04531T0
MKTPRGGAPVLLPLMLLSLLHASRAQSGCTGHPAIPGIPGIPGTPGSDGKPGTPGIKGEKGLPGLAGDHGELGEKGDPGFPGIPGKVGPKGPVGPKGAPGPPGVHGPKGESGDYKATQKIAFSATRTINSPLRRDQVIRFDHMITNTNNNYEYRNGKFTCRVPGLYYFTYHASSRGNLCINLMRGREQTQKVLTFCDYVYNTFQVTTGSVVLKLELGETVFLQATDKNALDKAKCDLE*