Sequence detailsbmy_04539 (Coding sequence)

Part of scaffold_157 (SequenceType object (1))

For more information consult the page for scaffold_157 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HNRNPRENSTTRG00000007752 (Bottlenosed dolphin)

Gene Details

heterogeneous nuclear ribonucleoprotein R

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007326, Bottlenosed dolphin)

Protein Percentage 81.42%
cDNA percentage 82.08%
Ka/Ks Ratio 0.09503 (Ka = 0.0011, Ks = 0.0119)

HNRNPRENSBTAG00000016578 (Cow)

Gene Details

heterogeneous nuclear ribonucleoprotein R

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022054, Cow)

Protein Percentage 93.28%
cDNA percentage 93.74%
Ka/Ks Ratio 0.27372 (Ka = 0.0374, Ks = 0.1367)

Additional orthologs identified in other species via the OPTIC pipeline.

HNRNPR (Human)   Hnrnpr (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1521 bp    Location:947745..929264   Strand:-
Raw sequence 
>bmy_04539
ATGTGGGGAAAATCAGAGGAGCCGACTGACAAGGAAATCGGCATTGCTAAACTTACTGATGATTTGGGAATATTGTTCTATGTTGATGCCCTGAAAGTCATTATAATAAAAACTAAGGTCTTTGTAGGTAAAATACCAAGAGATTTATATGAGGATGAGTTGGTGCCCCTTTTTGAAAAGGCTGGTCCCATTTGGGATCTASGTCTTATGATGGATCCACTGTCTGGTCAGAACAGAGGGTATGCATTTATCACCTTCTGTGGAAAGGAAGCTGCACAGGAAGCTGTTAAACTGTGTGACAGCTATGAMATTCGCCCTGGTAAACACCTTGGAGTGTGCATTTCTGTGGCAAACAACAGGCTTTTTGTTGGATCAATTCCGAAGAATAAGACTAAAGAAAACATTCTGGAAGAATTCAGTAAAGTCACAGAGGGTTTGGTGGACGTTATTCTCTATCATCAACCSGATGACAAAAAGAAGAATCGGGGGTTCTGCTTCCTTGAGTATGAGGATCACAAGTCAGCAGCACAAGCCAGACGCCGGCTGATGAGTGGAAAAGTAAAAGTATGGGGAAATGTAGTTACAGTTGAATGGGCTGACCCTGTGGAAGAACCAGATCCAGAAGTCATGGCTAAGGTGAAAGTTTTATTTGTGAGAAACTTGGCTACTACAGTGACAGAAGAAATATTGGAAAAGTCGTTTTCTGAATTTGGAAAACTTGAAAGAGTGAAGAAGTTGAAAGATTATGCATTTGTTCATTTCGAAGACAGAGGAGCAGCTGTTAAGGCCATGGATGAAATGAATGGCAAAGAAATAGAAGGGGAAGAAATTGAAATAGTCTTAGCCAAGCCACCAGACAAGAAAAGGAAAGAGCGCCAAGCTGCTAGACAGGCCTCCAGAAGCACTGCGTATGAAGATTATTACTATCACCCTCCTCCTCGTATGCCACCTCCAATTAGAGGTCGGGGTCGTGGTGGGGGGAGAGGTGGATATGGCTACCCTCCAGATTACTATGGCTATGAAGATTACTATGATGATTRCTATGGTTATGATTATCACGACTATCGTGGAGGCTATGAAGATCCCTACTACGGCTATGATGATGGCTATGCAGTAAGAGGAAGAGGAGGAGGAAGGGGAGGGCGAGGTGCTCCACCACCACCAAGGGGGCGGGGAGCACCACCTCCAAGAGGTAGAGCTGGCTATTCACAAAGGGGGRCACCTTTGGGACCACCAAGAGRYTCTAGGGGTGGCAGAGGGGGTCCTGYACAACAGCAGAGAGGCCGTGGTTCCCGTGGATCTCGGGGCAACCGTGGGGGCAATGTAGGAGGCAAGAGAAAGGCAGATGGGTACAACCAACCTGATTCCAAGCGCCGTCAGACCAACAACCAACAGWACTGGGGTTCCCAGCCCATCGCTCAACAGCCGCTTCAGCAAGGTGGTGACTATTCTGGTAACTATGGTTACAATAATGACAACCAGGAATTTTATCAGGATACTTATGGGCAACAGTGGAAATAG

Related Sequences

bmy_04539T0 SequenceType object (3)

Length: 507 aa      View alignments
>bmy_04539T0
MWGKSEEPTDKEIGIAKLTDDLGILFYVDALKVIIIKTKVFVGKIPRDLYEDELVPLFEKAGPIWDLXLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYXIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRGGGRGGYGYPPDYYGYEDYYDDXYGYDYHDYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGXPLGPPRXSRGGRGGPXQQQRGRGSRGSRGNRGGNVGGKRKADGYNQPDSKRRQTNNQQXWGSQPIAQQPLQQGGDYSGNYGYNNDNQEFYQDTYGQQWK*