Part of scaffold_157 (Scaffold)

For more information consult the page for scaffold_157 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TCEA3 ENSTTRG00000007775 (Bottlenosed dolphin)

Gene Details

transcription elongation factor A (SII), 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007343, Bottlenosed dolphin)

Protein Percentage 92.18%
cDNA percentage 94.56%
Ka/Ks Ratio 0.40808 (Ka = 0.045, Ks = 0.1104)

BT.28947 ENSBTAG00000038865 (Cow)

Gene Details

transcription elongation factor A protein 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004501, Cow)

Protein Percentage 90.14%
cDNA percentage 89.68%
Ka/Ks Ratio 0.14745 (Ka = 0.057, Ks = 0.3867)

TCEA3  (Minke Whale)

Gene Details

transcription elongation factor A (SII), 3

External Links

Gene match (Identifier: BACU005768, Minke Whale)

Protein Percentage 92.18%
cDNA percentage 95.12%
Ka/Ks Ratio 0.57727 (Ka = 0.045, Ks = 0.078)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1068 bp    Location:1032971..1006557   Strand:-
>bmy_04542
CCCCACTGTCGGGAGGCAGGCGGCCGAGGGGGTGTGGGGGGAGAGCCCCGCCCCCGCCGGGCGTGTGTGTCGGGTGCGTCTGGGGCCCGCGCGGCTTGCGCGCCCTCAGCCTTTGCGCCTCCGGCCCCCGGAACCCGGCTGCCGCCCCTGCGCCCCTCGTCCCGCCGGGCGTCGCGGGCCAACATGGGCCAGGAAGAGGAGCTGCTGAGGATCGCCAAGAAGCTGGAGAAGATGGTGGCCAGGAAGAACACGGAAGGGGCCCTCGACCTTCTGAAGAAGCTGAACAGCTGGCAGATGTCCATCCAGCTACTCCAGACCACCAGGATTGGAGTTGCCGTGAATGGGGTCCGCAAGCACTGCTCTGACAAGGAGGTGGTGTCCTTGGCCAAAGTCCTCATCAGAAACTGGAAGCAGCTGCTGGCACCCCCCAAAGGAGAAAAAAGAGAGGAAAGAGTAAAAGCAAAGAAGAAGGAAAAAGGGCTTGACTGTTCAGATTGGAAGCCAGAGACAAGCCTTTCTCCACCAAGGAAAAAACGAGTGGAAGAGCCCAAAGACAGGAGAGACTCTGTGGACTCCAAGTCTTCGGCCACCTCCTCTCCAAAAAGACCATCGATGGAAAGATCAAACAGCGGCAAATCGAAAGCAGAGACTCCCAGAACACCCAGCAGCCCCTCGAGCCCCACCTTTGCCCCCTCTGTCTGCCTCCTGGCGCCCTGCTATCTCACGGGGGACTCTGTCCGGGACAAGTGTGTGGAGATGCTCTCCGCGGCCCTGAAGGCGGACGACGATTACAAGGACTATGGGGTCAACTGTGACAAGATGGCATCAGAAATCGAAGACCATATCTACCAGGAGCTCAAGAGCACAGATATGAAGTACCGGAACCGCGTGCGCAGCCGAATCAGCAACCTCAAGGACCCCAGGAACCCCGGCCTGAGGCGGAACGTGCTCAGCGGGGCCATCTCCTCTGGGCTCATTGCCAAGATGACGGCAGAGGTGAGGGTCGGGGCCGGGACCTCTGCGTGGTGGGACAAGGGGCCGGGCCCCTCCAGCCTTGCCCAAGTCTGA

Related Sequences

bmy_04542T0 Protein

Length: 356 aa      View alignments
>bmy_04542T0
PHCREAGGRGGVGGEPRPRRACVSGASGARAACAPSAFAPPAPGTRLPPLRPSSRRASRANMGQEEELLRIAKKLEKMVARKNTEGALDLLKKLNSWQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIRNWKQLLAPPKGEKREERVKAKKKEKGLDCSDWKPETSLSPPRKKRVEEPKDRRDSVDSKSSATSSPKRPSMERSNSGKSKAETPRTPSSPSSPTFAPSVCLLAPCYLTGDSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISSGLIAKMTAEVRVGAGTSAWWDKGPGPSSLAQV*