Part of scaffold_151 (Scaffold)

For more information consult the page for scaffold_151 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PSMD5 ENSTTRG00000006635 (Bottlenosed dolphin)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006279, Bottlenosed dolphin)

Protein Percentage 95.17%
cDNA percentage 96.16%
Ka/Ks Ratio 0.44993 (Ka = 0.03, Ks = 0.0667)

PSMD5 ENSBTAG00000016952 (Cow)

Gene Details

26S proteasome non-ATPase regulatory subunit 5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022548, Cow)

Protein Percentage 94.37%
cDNA percentage 92.05%
Ka/Ks Ratio 0.16315 (Ka = 0.0362, Ks = 0.2218)

PSMD5  (Minke Whale)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 5

External Links

Gene match (Identifier: BACU007300, Minke Whale)

Protein Percentage 96.51%
cDNA percentage 96.87%
Ka/Ks Ratio 0.41511 (Ka = 0.0236, Ks = 0.0569)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1122 bp    Location:322205..303798   Strand:-
>bmy_04568
ATGGCGGCCCAGGCAGTGTTGCTGCTGAGGGAGGTGTCTCGGCTGGAAGCGCCGCTGGAGGAGCTGCGCGCTCTGCACTCGGTGCTGCAGTCGGTGCCTCTCAGCGAGCTCCGCGAGCAAGCGGCGGAACTGCGCCTTGGCCCGCTTTTCTCCCTGCTCAACGAGAACCATCGGGAACAGACTASTTTGTGTGTTGGAAGAATTGTTGAAAATTCTGATGCTGTTACTGAGATTCTAAATAATGCTGAATTACTAAAACAAATCGTTTATTGTATTGGTGGAGAGAATCTATCTGTAGCTAAAGCGGCCATTAAATCCCTGTCAAGAATATCACTGACCCAGGCTGGACTGGAGGCTTTATTTGAAAGTAATCTGCTGGATGATTTGAAAAGTGTAATGGAAACAAATGACATTGTTCGATACAGGGTGTATGAGCTAATTGTGGAGATTTCTTCTGTGTCACCAGAATCTTTAAACTACTGTACCACCAGTGGATTGGTAACGCAGCTCCTCCGAGAACTGACCGGTGAGGATGTGCTAGTCAGGCATGTGTGCTGTTTAAAAGTTGCCAATCACATGTTTTTTGGAAACCTGGCTATCATGGATAGTCCTCAGCAGATCTGTGAGCGTTATCCTGTCTTTGTGGAAAAAGTCTTTGAAATGACAGAAAGTCAAGACCCCACCATGATTGGTGTAGCAGTGGACACGATTGGAATTCTAGGATCCAATGTTGAAGGAAAACAAGTTTTACAGAAAACAGAATCCTGGTTTTCTTCTTTATCTCGGGACCCGCTGGAGCTCTTCCGTGGCATCAGTAATCAACCCTTCCTTGAACTACACTGTGCTGCCTTAAAAGTGTTCACGGCCATTGCAAACCAACCCTGGGCTCAGAAACTTATGTTTAACAGTCCAGGTTTTGTAGAATATGTGATGGACCGGTCCGTAGAGCATGACAGAGCTTCAAAGGATGCCAAATATGAACTGGTGAAAGCACTTGCCAATTCTAAGACAATTGCAGAAATCTTTGGGAACCCAAATTATTTGAGGCTCAGAACTTACCTGAGCGAAGGTCCATACTATGTGAAACCTATTTCCACAACAGCAGTGGAAGGAGCAGAGTGA

Related Sequences

bmy_04568T0 Protein

Length: 374 aa      View alignments
>bmy_04568T0
MAAQAVLLLREVSRLEAPLEELRALHSVLQSVPLSELREQAAELRLGPLFSLLNENHREQTXLCVGRIVENSDAVTEILNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALFESNLLDDLKSVMETNDIVRYRVYELIVEISSVSPESLNYCTTSGLVTQLLRELTGEDVLVRHVCCLKVANHMFFGNLAIMDSPQQICERYPVFVEKVFEMTESQDPTMIGVAVDTIGILGSNVEGKQVLQKTESWFSSLSRDPLELFRGISNQPFLELHCAALKVFTAIANQPWAQKLMFNSPGFVEYVMDRSVEHDRASKDAKYELVKALANSKTIAEIFGNPNYLRLRTYLSEGPYYVKPISTTAVEGAE*