Part of scaffold_151 (Scaffold)

For more information consult the page for scaffold_151 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRAF1 ENSTTRG00000006660 (Bottlenosed dolphin)

Gene Details

TNF receptor-associated factor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006300, Bottlenosed dolphin)

Protein Percentage 97.48%
cDNA percentage 97.9%
Ka/Ks Ratio 0.15003 (Ka = 0.0106, Ks = 0.0707)

TRAF1 ENSBTAG00000003012 (Cow)

Gene Details

TNF receptor-associated factor 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000041215, Cow)

Protein Percentage 93.7%
cDNA percentage 92.86%
Ka/Ks Ratio 0.0712 (Ka = 0.0266, Ks = 0.374)

TRAF1  (Minke Whale)

Gene Details

TNF receptor-associated factor 1

External Links

Gene match (Identifier: BACU007297, Minke Whale)

Protein Percentage 99.5%
cDNA percentage 99.16%
Ka/Ks Ratio 0.05417 (Ka = 0.0021, Ks = 0.0384)

Genome Location

Sequence Coding sequence

Length: 1194 bp    Location:421833..399009   Strand:-
>bmy_04571
ATGGCCTCTGGCTCGGCCAGCAGCCCCCGCCCGGCCCCTGATGAGAACGAGTTCCCCTTTGGGTGCCCCCCCACCGTCTGCCAGGACCCACCAGAGCCCAGGCCCCTCTGCTGCGCTGTCTGTCTCTCTGAGAACGTGAGGAATGTTGAGGATCGGATCTGTCCCAAATGCAAAGGGGATGACACACCATCCGAAAGGCCAGGAAGCCTTCTGTCTCAGGAGCAGGATCACCCCGAGGTGGCTGAGGCTGGAGTTGGGTGTCCCTTTGCAGGTGTTGGCTGCTCCTTCAAGGGGGGCCCAAAGTTCATGCAGGAGCATGAGGTCACCTCCCAGGCCACCCACCTGAACCTGCTGTTAGGGTTCATGAAACAGTGGAAGGCCCAGCTGGGCTCTGGCCTGGGGTCTGGGCCCATGGCCCTGGAGCGGAATCTGTCAGACCTGCAGCTGCAGGGGGCTGTGGAGGCAGCTGGGGACCTAGAGGTGGACTGCTACCGGGCCCCCTGCTCCGAGAGCCAGGAGGAGCTGGCCCTGCAGCACTTCATGAAGGAGAAGCTCCTGACGGAGCTGGAGGGGAAGCTGTGCGTGTTCGAGAACATCGTCGCCGTCCTCAACAAGGAGGTGGAGGCCTCCCACCTGGCCCTGGCCGCCTCCATCCACCAGAGCCAGCTGGACCGTGAGCACATCCTGAGCTTGGAACGGAGGGTGGTGGAGCTGCAGCAGACCTTGGCCCAGAAAGACCAGGCCCTGGGCAAGCTGGAGCAGAGCTTCCGCCTCATGGAAGAGGCCTCCTACGACGGCACCTTCCTATGGAAGGTCACCAGTGTCACCAGGCGGTGCCATGAGTCAGCCTGCGGCAGGACCGTCAGCCTCTTCTCCCCAGCTTTCTACACTGCCAAGTACGGATACAAGTTGTGCCTGCGGCTCTACCTGAATGGGGACGGGACGGGGAAGAGGACCCACCTGTCCCTCTTCATCGTCACTTTCATGCTGCTCGACCAGAACAACCGTGAGCACGCCATCGACGCCTTCCGGCCCGACCTGAACTCAGCATCCTTCCAGCGGCCCCAGAGCGAAACCAATGTGGCCAGCGGCTGCCCGCTCTTCTTCCCCCTCAACAAGCTGCAGTCACCCAAGCATGCCTATGTGAAGGACGACACCATGTTCCTCAAGTGCATCGTGGAGACAAACGCTTAG

Related Sequences

bmy_04571T0 Protein

Length: 398 aa      View alignments
>bmy_04571T0
MASGSASSPRPAPDENEFPFGCPPTVCQDPPEPRPLCCAVCLSENVRNVEDRICPKCKGDDTPSERPGSLLSQEQDHPEVAEAGVGCPFAGVGCSFKGGPKFMQEHEVTSQATHLNLLLGFMKQWKAQLGSGLGSGPMALERNLSDLQLQGAVEAAGDLEVDCYRAPCSESQEELALQHFMKEKLLTELEGKLCVFENIVAVLNKEVEASHLALAASIHQSQLDREHILSLERRVVELQQTLAQKDQALGKLEQSFRLMEEASYDGTFLWKVTSVTRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVTFMLLDQNNREHAIDAFRPDLNSASFQRPQSETNVASGCPLFFPLNKLQSPKHAYVKDDTMFLKCIVETNA*