Part of scaffold_151 (Scaffold)

For more information consult the page for scaffold_151 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

STOM ENSTTRG00000005366 (Bottlenosed dolphin)

Gene Details

stomatin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005046, Bottlenosed dolphin)

Protein Percentage 97.06%
cDNA percentage 97.2%
Ka/Ks Ratio 0.23011 (Ka = 0.0146, Ks = 0.0637)

BT.87711 ENSBTAG00000038375 (Cow)

Gene Details

erythrocyte band 7 integral membrane protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000052671, Cow)

Protein Percentage 91.63%
cDNA percentage 90.66%
Ka/Ks Ratio 0.15536 (Ka = 0.0438, Ks = 0.2819)

STOM  (Minke Whale)

Gene Details

stomatin

External Links

Gene match (Identifier: BACU007292, Minke Whale)

Protein Percentage 78.1%
cDNA percentage 82.22%
Ka/Ks Ratio 0.66402 (Ka = 0.1859, Ks = 0.28)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 720 bp    Location:801979..773323   Strand:-
>bmy_04578
ATGTCTGACAAGCGGCCATCAGCGGAAGCCCAAGCCCGGCGGCTTCCCGACTCCTTCACGGGTAGCCCCAGTGCAGGCCTGGGACCTTGTGGATGGATTTTGGTGGCTATATCATTCTTGTTCACAGTTTTAACTTTCCCGTTGTCAGTATGGATGTGCATAAAGATCATAAAAGAATATGAAAAAGCCATCATCTTTAGACTGGGTCGCATCTTACAAGGAGGCGCCAAAGGACCTGGTTTGTTTTTTATTCTGCCATGCACTGACAGCTTCATCAAAGTGGATATGAGAACTATTTCATTTGATATTCCTCCTCAGGAGATCCTCACTAAGGATTCAGTGACAGTTAGTGTGGACGGCGTGGTCTACTACCGTGTCCAGAATGCTACCCTGGCTGTGGCGAACATCACCAACGCTGACTCAGCAACCCGTCTTTTGGCACAAACGACTCTGAGGAACGTCCTGGGCACCAAGAACCTTTCCCAGATCCTCTCCGACAGGGAAGAAATTGCACACAACATGCAGGTCATTGCAGCTGAGGGAGAAATGAATGCATCCAGGGCTCTGAAAGAAGCCGCCATGGTCATCACTGAATCTCCTGCCGCCCTTCAGCTCCGGTACCTTCAGACACTGACCACCATTGCTGCTGAGAAAAACTCGACCATCGTCTTCCCTCTGCCCATAGATATGCTGCAAGGCGTCATAGGGGCAAAACAGTGA

Related Sequences

bmy_04578T0 Protein

Length: 240 aa      View alignments
>bmy_04578T0
MSDKRPSAEAQARRLPDSFTGSPSAGLGPCGWILVAISFLFTVLTFPLSVWMCIKIIKEYEKAIIFRLGRILQGGAKGPGLFFILPCTDSFIKVDMRTISFDIPPQEILTKDSVTVSVDGVVYYRVQNATLAVANITNADSATRLLAQTTLRNVLGTKNLSQILSDREEIAHNMQVIAAEGEMNASRALKEAAMVITESPAALQLRYLQTLTTIAAEKNSTIVFPLPIDMLQGVIGAKQ*