Sequence detailsbmy_04601 (Coding sequence)

Part of scaffold_148 (SequenceType object (1))

For more information consult the page for scaffold_148 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RORAENSTTRG00000007718 (Bottlenosed dolphin)

Gene Details

RAR-related orphan receptor A

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007299, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.34%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.033)

RORAENSBTAG00000015904 (Cow)

Gene Details

nuclear receptor ROR-alpha

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000021144, Cow)

Protein Percentage 99.56%
cDNA percentage 97.67%
Ka/Ks Ratio 0.02331 (Ka = 0.002, Ks = 0.0866)

Additional orthologs identified in other species via the OPTIC pipeline.

RORA (Human)   Rora (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1374 bp    Location:220639..184720   Strand:-
Raw sequence 
>bmy_04601
CAAATTGAAATTATTCCATGCAAGATCTGTGGAGACAAATCATCAGGAATCCATTATGGTGTCATTACTTGTGAAGGCTGCAAGGGCTTTTTCAGGAGAAGTCAGCAAAGCAATGCCACCTACTCCTGTCCTCGTCAGAAGAACTGTTTGATTGATCGAACCAGTAGAAACCGCTGCCAACACTGTCGATTACAGAAATGCCTTGCCGTGGGGATGTCTCGAGATGCTGTAAAATTTGGCCGCATGTCGAAAAAGCAACGCGACAGCTTGTACGCAGAAGTACAGAAACACCGGATGCAGCAGCAGCAGCGAGACCACCAACAGCAGCCTGGAGAGGCCGAGCCGCTGACTCCCACCTACAGCATCTCGGCCAACGGGCTCACGGAGCTTCACGACGACCTCAGCAGCTACATCGACGGGCACACCCCCGAGGGCAGCAAGGCAGACTCTGCCGTCAGCAGCTTCTACCTGGACATACAGCCTTCCCCGGACCAGTCAGGTCTTGATATCAACGGAATCAAACCAGAACCAATATGTGACTACACACCAGCATCAGGCTTCTTTCCCTACTGCTCTTTCACCAATGGAGAGACGTCCCCAACTGTGTCCATGGCAGAACTAGAACACCTTGCACAGAATATATCTAAGTCACATCTGGAAACTTGCCAATACTTGAGAGAAGAGCTCCAGCAGATAACGTGGCAGACCTTTCTGCAGGAGGAGATTGAGAATTACCAAAACAAGCAGCGGGAGGTAATGTGGCAATTGTGTGCCATCAAAATTACAGAAGCTATACAGTATGTGGTGGAGTTTGCCAAACGCATTGATGGATTTATGGAACTGTGTCAAAACGATCAAATTGTGCTTCTCAAAGCAGGTTCTCTGGAGGTGGTATTTATCAGAATGTGCCGTGCCTTTGACTCTCAGAACAATACCGTGTACTTTGATGGGAAATATGCTAGCCCCGACGTCTTCAAATCCTTAGGTTGTGAAGACTTTATTAGCTTTGTATTTGAATTTGGAAAGAGTTTATGTTCTATGCACCTGACTGAAGATGAAATTGCATTGTTTTCTGCATTTGTCCTGATGTCAGCAGATCGCTCATGGCTGCAGGAAAAGGTAAAAATTGAAAAGCTGCAACAGAAAATTCAGCTAGCTCTTCAACACGTCCTACAGAAGAATCACCGAGAAGATGGAATACTAACAAAGTTAATATGCAAGGTGTCTACATTAAGAGCCTTATGTGGACGACATACAGAAAAGCTAATGGCGTTTAAAGCAATATACCCAGACATTGTGCGACTTCATTTTCCTCCATTATACAAGGAATTGTTCACTTCAGAATTTGAGCCAGCAATGCAGATTGATGGGTAA

Related Sequences

bmy_04601T0 SequenceType object (3)

Length: 458 aa      View alignments
>bmy_04601T0
QIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYSISANGLTELHDDLSSYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG*