Part of scaffold_148 (Scaffold)

For more information consult the page for scaffold_148 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VPS13C ENSTTRG00000015781 (Bottlenosed dolphin)

Gene Details

vacuolar protein sorting 13 homolog C (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014982, Bottlenosed dolphin)

Protein Percentage 93.95%
cDNA percentage 94.86%
Ka/Ks Ratio 0.35136 (Ka = 0.0124, Ks = 0.0353)

VPS13C ENSBTAG00000038920 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053327, Cow)

Protein Percentage 91.94%
cDNA percentage 93.8%
Ka/Ks Ratio 0.25785 (Ka = 0.0389, Ks = 0.1508)

VPS13C  (Minke Whale)

Gene Details

vacuolar protein sorting 13 homolog C (S. cerevisiae)

External Links

Gene match (Identifier: BACU001030, Minke Whale)

Protein Percentage 98.39%
cDNA percentage 98.81%
Ka/Ks Ratio 0.24649 (Ka = 0.0063, Ks = 0.0254)

Genome Location

Sequence Coding sequence

Length: 7455 bp    Location:1606594..1530630   Strand:-
>bmy_04604
TATGTTGCTTATATTGTGGCACTGAAGTTAGTAAGCACCTCTGTTACAATAAGAGAAAACAGAAATATTCCAGAAATACTGAAAATTCAGATAATTGGCCTTGGCACCCAAGTATCTCAGCGACCAGGAGCACAAGCACTTAAGGTGGAAGCAAAATTAGAACACTGGTATATAACAGGTCTGAGACAGCAAGATATTATACCATCACTTGTGGCTTCAATTGGCGATACTGCATCATCCTTGCTTAAAATTGAATTTGAAACCAATCCAGAGAATAGTACTGCTGACCAGACTCTGGTTGTTCAGTCTCAGCCTGTGGAGGTCATCTACGATGCTAAAACCATCAATGCAGTGGTTGAATTCTTTCAGTCAAATAGGGGATTAGATCTTGAGCAAATAACATCAGCTACATTGATGAAACTGGAAGAAATTAAAGAGAGAACAGCTACAGGACTTACACATATTATTGAAACCCGAAAAGTTCTTGATTTAAGGATAAATCTGAAGCCCTCGTATCTAATAGTTCCACAGACAGGTTTCCACCATGAAAAGTCAGATCTTCTCATCTTAGATTTTGGTACATTTCAGCTTAACAGTAAAGATCAAGGTTTGCAGAAGACTAGTAATTCATCTCTGGAAGAAATAATGGATAAGGCATATGACAAGTTTGATGTGGAAATAAAAAGTGTGCAACTACTCTTTGCAAGATCAGATGAAAACTGGAAAAAGTGTCGATTTCAGCATCCATCAACTATGCATATATTGCAACCCATGGATATTCATGTTGAGTTGGCCAAGGCAATGGTGGAAAAAGACATTAGAATGGCTAGATTTAAAGTATCTGGAGGGCTTCCTCTGATGCACGTGAGAATTTCTGATCAGAAGATGAAAGACATGCTCCGTTTGATTAACAGTATACCCTTGCCACAGAAATCATCTGCACAGTCTCCAGAGAGACAGGTATCCTCAATTCCTATTACACCAGCTAGGACAAAAGGCCTACTTGGTACGCCACTGTTGCTAGATGGAGTGGAATCAGGTGAGGAAGAGTCTGATGATGAGTATTTTGATGCTGAGGATGGAGACACACAGACTGGTAAAAGTATGAAAGGGTCAGACATAAAAAAGGTTGCTGAGGCCCCAAATGAGGAGCTCATTCATCTTCTACTGAAGTTTGAAGTTAAAGAGGTGATTTTGGAATTTACCAAACAACAGAAGGAAGAGGATACAATTCTAGTGTTTAATGTTACTCAGTTAGGAACAGAGGCTACAATGAGAACATTTGATTTAACTGTGGTAACTTACTTAAAGAAAATCAGCTTGGATTACCATGAAATTCAAGGGTCCAAAAAGAAGCCCCTTCACTTGATTAGCTCTTCTGACAAACCTGGATTAGATCTCTTAAAAGCAGAATACATTAAGGCTGATAAGAATGGACCCAGTTTTCAAACTAGTTTTGAAAAAACTGAACAAACACTTAAGGTGGCTTTTTCATCTTTAAACCTGTTGCTGCATACACAAGCTCTTCTCTCTTCTATTAATTACCTGACAACCATTATTCCATCAGATGGCCAAAACATGGTGATTGTATCCTCTAAGGAGAGTGACATTATTCACTTCAGGCTGTTTGCCAAGTTGAATGCTTTCTGTGTTATTGTTTGTGATGAGAAGAACAATATTGCTGAAATCAAGATTCAAGGACTCGATTCTTCCCTTTCTCTTCAGTCAAGAAAACAGTCACTATTTGCCAGATTGGAAAATATTATTGTCACAGATGTTGATCCTAAGACAGTTCATAAAAAAGCTGTGTCAATAATGGGAAATGAAGTCTTTCATTTTAACTTGGATTTGTATCCAGATGCTACTGAGGGGGATTCCTATACTGACATGTCCAAAGTGGATGGTGTGGTGTCACTGAACGTTGGCTGTATTCAGATTGTCTATCTCCATAAATTCCTCATGTCACTTCTGAACTTCCTGAACAATTTCCAGACAGCCAAAGAGGCTCTGAGTGCTGCCACTGCTCAGGCTGCAGAAAAGGCTGCCACAAGTGTGAAAGATTTTGCCCAGAGGAGCTTTCGTGTTTCTATCAATATTGATTTGAAAGCACCAGTTATAGTCATCCCACAGTCTTCCGTTTCCACCAATGCAGTAGTGGTAGATCTTGGGTTAATCAGAGTTCAGAATCAGTTCAGTCTGATATCTGGTGAAGACTACTCAGACCCTCCAGTAATTGATAGAATGGACGTGCAGCTAACAAAGCTTAAGCTTTCTAGGACAGTGATCCAGCCAGGCTTCTCCCATCCTGATATTCAGCTGTTGCATCCAATTAATTTGGAGTTTTCTGTAAATCGGAATCTAGCTGCATCTTGGTACCACAAGGTTAATCTAAATCAAGAAGATCTTAATCTTTTATTTAGAATACTAGCAGAAAATCTCGGTGAGGCTACTGAAGACTTGAATAAAGTGAAACCAAGAGTGCAAGAGACAGATATGCATGTTTCACAAGATAGTTTAACAGCTGGAGTGGAAGAAATTAGATCTGTAGACATCATTAATGTGCTGCTGAAATTTGAAATCAAAGAGGTCGTGATTACTTTGATGAAAAAAGCAGAAAAGAAAGGAAGGCTTTTACATGAACTAAATGTCCTGCAGCTTGGACTGGAAGCTAAAGTTAAAGCCTACGACCTGACTGCTGAAGCTTATCTAAAAAAAATTAGTATGCAATGCTTTGAGTTCACTGACTCTAAAGGAGAACCTCTTCACATTATTAACTCTTCTAATGTAACAGATGAACCCCTTCTGAAAATGTTATTGAAAAAGGCAGACAGTGATGGACCAGAATTTAAAACCATCCATGACAATACCAAACAAAGACTTCAGGTTTCATTTTCATCCTTAAACTTAGTTCTTCATTTGGAAGCTTTACTGTCCTTCATGGATTTTTTATCATCTGCTTTTCCATCCTCTGAACCTTCTAAGAAGGAATCGGAGCTGAAGCCACTTACGGGGGAGTCCAGGAGTATCATTGCGAAAACTGTATCCAGCAACACTTCTCAAGATGATGTGTTTGATTTAAAGGTCATAGCTGAATTAAATGCATTTAATGTCTTTGTCTGTGATCAGAAGTGTAATATTGCAGATATTAGAATACATGGAATGGATGCCTCTATTTCTGTGAGGCCAAAGCAGACCGACATGTTTGCCAGACTTAAGGATATCATAGTTACGAATGTTGATTCGACTTCCATTCACAAAAAGGCTGTCTCTATTTTGGGAGATGAAGTCTTTAGGTTCCAAATGACTCTTTATCCAGACGCCACAGAAGGAAAGGCCTATGCTGATATGTCTAAAGTAGATGGCAAACTTACTCTCAAAGTGGGTTGTATTCAAATTGTTTATGTTCATAAATTCTTCATGTCTCTTTTGAACTTCCTCAACAATTTTCAAACCGCCAAAGAAGCTTTGAGCACCGCTACAGTCCAGGCTGCAGAAAGAGCTGCTTCCAGCATGAAAGACTTGGCTGAAAAGAGCTTCCGCCTTTTGATGGATATCAACTTGAAAGCACCAGTTATTCTCCTTCCTCAGTCTTCAGTATCACCTAATGCTGTTATAGCAGATCTGGGTTTAATCAAAGTTGAAAACCAATTTAGTGTAGTTTCTGTGGAACAGCATTCTCTTCCCCCAGTCATTGATAAAATGAACATCCAACTCACTCAGCTGAAGCTGTCCAGAACAATTTTGCAGGCTGGCTTACCACAGCATGACATTGAAATTTTAAAACCAGTCAACATGCTTTTATCCATACAGCGAAATTTAGCAGCATCGTGGTATGTGAAAATTCCAGGGATGGAGATAAAAGGAAAACTAAAACCTATGCAGGTTGCTCTCAGTAAAGATGACTTAACAGTTTTAATGAAAATTTTGCTAGAGAATCTTGGAGAAGCTTCTTCACAGCCAAGCCCTACACAGTCTACCCAGGAGGCTATAATTGTAAGAAAAGACGTTTCCAGTAGACCTGACCACCTCAAAGAACAAGAAAATGGGACAGACTCAAAGCTTTCTTTGGACCAGAATGTCACTCTCCAGTTTGACTTTCACTTTGAATCTCTTTCTATTATACTTTATAACAATGATCCCCGCCAGGAATCCAAACTTTCATTTCATAATGACAGTTTCCGGCTTGGTGAACTCAGACTACATCTTATGGCCTCTTCAGGGAAGATGTTTAAGGATGGCTCAATGAATRTCAATATTAAACTTAAGACATGCACCCTTGATGATCTCAGAGAAGGAATTGAGAGAGCAACATCAAGAATGATTGATAAGAAGAATGGCCAAGATAACAACAGTTCTATGATTGACATAAGTTACACACAAGACAAGAATGGAAGTCATATTGATGCTGTTCTTGACAAGCTGTATGTTTGTGCCAGTGTGGAATTTCTGATGACTGTGGCAGATTTCTTTATCAAAGCTGTACCTCAGAGTCCAGAAAATATGGCTAAAGAATCACAGATTCCACTGCGACAGACTGCCTTAGCAAAAATCAAGATGGAGAAAGATGACTCTGTGAGACCAAATATGACTTTAAATGCCAAGATCACAGACCCAGAAGTGGTGTTTGTTGCCAACCTGACAAAGGCTGATGCCCCTGCTCTGACAGCCTCATTCCGGTGTAACCTCTGTCTATCGACATCCAAACTCGAGCAAATAATGAAAGCGTCTGTGAGAGATCTTAAAGTGCTTGCTTGCCCGTTTCTCGGAGAAAAAAGAGGAGAAAACATTACCACAGTCTTACAGCCCTGTTCTCTATTTATGAAAAAATGTACATGGGCTTCAGGAAAAGAAGATATAAATATTGAAGTTGAAGAATTTATAATTAAGATTTCACCCATAATTCTTAATACTGTGATGACAATAATGGCTGCTCTGTCTCCAAAGACAAAAGAAGATGAATCCAAAGATATATCTAAGGAAACGGAACATCTTTGGGGTGTCAAATCTATTAGTGATTACAGCTCTTGGTTTCTTGGTGTTGACATGGCCACAGAAATAACAGAAAATTTCAGAGACATTGAAAATCCACTGATAGAGGAAAATTGTGCTGTTGTTGTCCAGTCAGTTCAAGTTACCTTAGAATGTGGCCTTGGGCATCGAACTGTACCTCTATTATTGGCAGAGTCTAAGTTTTCAGGAAACGTTAAAAATTGGACTTCSCTAATGGCTGCTTCTGCTGACATGACACTAGAGGTTCATTATTACAATGAGACCCATGCTGTATGGGAGCCACTGATTGAGAGAGTGGAGGGGAAGAGACCATGGAATTTAAGGCTTGCTGTAAAGAAGAATCCAGTCCAGGATAAAAGTTTGATGCCAGGAGATTATTTTATTCTACTTCCTGAGCCAGAAACAGAAGTTGATATTTCTTCAGGAGATACAATGAATATAACAATATCCARAAGCTGTCTTAATGTTTTCAGCAATTTAGCAAAAGGTTTTTCAGAGGGCACTGCTTCTACTTTTGACTACTCTTTAAAAGACAGGGCACCTTTTACAGTAACAAATTCTGTAGGTGTTCCCATTAAGGTGCAGCCCAATCATAATCTCAGAGTGATGGGCTCCCTTGAGAAAAGTGATGTGTGTGATGTTGATGCCGGTCAGAAATTGGAATTGGAATATGCCAGCRTGGAACCTTCATGTCAAGGGAAACTATCTACACTGAGCCGTCAGGAGAGCTCCCTCTTCTCTATGACCTTTGCACCTCATGGATATACAGAAGTTACAAAAGTCCCTGTTGCCAGACCTGGACGGCGATTGTATAATGTATGGAATCCCAATGCCAGTCATTCTGACTCACTCGTGGTACAAATTGATGCAACTGAAGGGAACAAAGTAATTACCCTTCGTTCTCCTCTGCAGATTAAAAACCATTTCTCTATTGCTTTCATCATCTATAAATATGTTAAGAATGTGAAGTTATTGGAGCGCATTGGAGTAGCCAGACCTGAAGAGGAGTTCCATGTTCCTTTAGATTCATATAGATGTCAGTTGTTCATTCAGCCAGCTGGTATCTTAGAGAATCAGTACARAGAATCCACCACATATATTTCCTGGAAGGAAGAACTTCATCGGAGCAAGGAAATCAGATGCATGCTGCAGTGTCCGTCAACAGAAGTCAACTTCTTACCTCTTATAGTCAATACAATTGCTGTACCTGATGAATTAAGCTATATATGTACACACAGGAAAGACTGGGATCCAGCTTACATCATTCATCTTTACCCTACTGTCACTTTGCGGAATTTTCTCCCATATTCTCTAAGATATTTACTTGAGGGAACAGCAGAAACTCATGAGCTAGCAGAAGGCAGTGCTGCCAATGTTCTACATTCGAGAATCAGTGGAGAAATAATGGAATTAGTTCTGGTGAAATATCAGGGCAAAAACTGGAGTGGACATTTCCGTATATGTGATACACTTCCCGAATTCTTTCTTGTGTATTTTTCTTCTGATTCCACAGAAGCGTTGACAGTTGACCTGTCAATACATGTCAAGCGAATTGGCAGCCAGATGGAGCTATCCATCTTTAGTCCCTATTGGCTAATCAACAAGACTTCTCGGGTTCTCCAGTATCGTTCAGAAGAAATTCATGTGAAACATCCAGCTGATTTTAGGGATATTATTTTATTCTCTTTCAAGAAGAAGAACATTTTYAGTAAAAATAAGGTACAGTTAAAAATTTCAACTAGTTCATGGTCCAGTGGTTTTTCATTGGATACAGTGGGAAATTATGGGTGTGTGAAGTGTCCTGCCAACAATATGGAATACCTGGTTGGTGTTAGCATCAAAATGAGCAGTTTTAATCTTACACGAATAGTTACTTTGACTCCCTTTTATACTATTGTGAACAAGTCATCACTAGAACTAGAAGTTGGTGAAATTGCATCTGATGGCTCAATGCCAACTAATAAATGGAACTATATTGCTTCTTCAGAGTACCTTCCATTTTGGCCTGAAAAATTTTCAGGCAAACTTTGTGTGAGAGTGGTGGGCTATGAAGGATCCTCCAAACCATTCTTTTATAACCAACAGGATAATGGCACTTTATTGAGCTTAGAAGATCTGAATGGGGGTATCTTGGTGGATGTAGATACCGCTCCACATTCAACTGTCATAAGCTTTTCTGATTACCATGAGGGATCCGCACCTGCCCTAATAGATGAATGTGGACAGTTTCCGTATGATGCAAACATCCAGATACACTGGGTATCATTTCTAGATGGGCGCCAGAGAGTTTTACTTTTCACTGATGATGTTGCCTTGGTTTCCAAAGCACTGCAGGCAGAAGAAATGGAGCAGGCCAATCATGAAATAACTTTTTCTCTCCATAGTCTTGGGCTTTCACTGGTTAACAATGAAAACAAGCAAGAAGTTTCGTATATTGGGATAACC

Related Sequences

bmy_04604T0 Protein

Length: 2485 aa      View alignments
>bmy_04604T0
YVAYIVALKLVSTSVTIRENRNIPEILKIQIIGLGTQVSQRPGAQALKVEAKLEHWYITGLRQQDIIPSLVASIGDTASSLLKIEFETNPENSTADQTLVVQSQPVEVIYDAKTINAVVEFFQSNRGLDLEQITSATLMKLEEIKERTATGLTHIIETRKVLDLRINLKPSYLIVPQTGFHHEKSDLLILDFGTFQLNSKDQGLQKTSNSSLEEIMDKAYDKFDVEIKSVQLLFARSDENWKKCRFQHPSTMHILQPMDIHVELAKAMVEKDIRMARFKVSGGLPLMHVRISDQKMKDMLRLINSIPLPQKSSAQSPERQVSSIPITPARTKGLLGTPLLLDGVESGEEESDDEYFDAEDGDTQTGKSMKGSDIKKVAEAPNEELIHLLLKFEVKEVILEFTKQQKEEDTILVFNVTQLGTEATMRTFDLTVVTYLKKISLDYHEIQGSKKKPLHLISSSDKPGLDLLKAEYIKADKNGPSFQTSFEKTEQTLKVAFSSLNLLLHTQALLSSINYLTTIIPSDGQNMVIVSSKESDIIHFRLFAKLNAFCVIVCDEKNNIAEIKIQGLDSSLSLQSRKQSLFARLENIIVTDVDPKTVHKKAVSIMGNEVFHFNLDLYPDATEGDSYTDMSKVDGVVSLNVGCIQIVYLHKFLMSLLNFLNNFQTAKEALSAATAQAAEKAATSVKDFAQRSFRVSINIDLKAPVIVIPQSSVSTNAVVVDLGLIRVQNQFSLISGEDYSDPPVIDRMDVQLTKLKLSRTVIQPGFSHPDIQLLHPINLEFSVNRNLAASWYHKVNLNQEDLNLLFRILAENLGEATEDLNKVKPRVQETDMHVSQDSLTAGVEEIRSVDIINVLLKFEIKEVVITLMKKAEKKGRLLHELNVLQLGLEAKVKAYDLTAEAYLKKISMQCFEFTDSKGEPLHIINSSNVTDEPLLKMLLKKADSDGPEFKTIHDNTKQRLQVSFSSLNLVLHLEALLSFMDFLSSAFPSSEPSKKESELKPLTGESRSIIAKTVSSNTSQDDVFDLKVIAELNAFNVFVCDQKCNIADIRIHGMDASISVRPKQTDMFARLKDIIVTNVDSTSIHKKAVSILGDEVFRFQMTLYPDATEGKAYADMSKVDGKLTLKVGCIQIVYVHKFFMSLLNFLNNFQTAKEALSTATVQAAERAASSMKDLAEKSFRLLMDINLKAPVILLPQSSVSPNAVIADLGLIKVENQFSVVSVEQHSLPPVIDKMNIQLTQLKLSRTILQAGLPQHDIEILKPVNMLLSIQRNLAASWYVKIPGMEIKGKLKPMQVALSKDDLTVLMKILLENLGEASSQPSPTQSTQEAIIVRKDVSSRPDHLKEQENGTDSKLSLDQNVTLQFDFHFESLSIILYNNDPRQESKLSFHNDSFRLGELRLHLMASSGKMFKDGSMNXNIKLKTCTLDDLREGIERATSRMIDKKNGQDNNSSMIDISYTQDKNGSHIDAVLDKLYVCASVEFLMTVADFFIKAVPQSPENMAKESQIPLRQTALAKIKMEKDDSVRPNMTLNAKITDPEVVFVANLTKADAPALTASFRCNLCLSTSKLEQIMKASVRDLKVLACPFLGEKRGENITTVLQPCSLFMKKCTWASGKEDINIEVEEFIIKISPIILNTVMTIMAALSPKTKEDESKDISKETEHLWGVKSISDYSSWFLGVDMATEITENFRDIENPLIEENCAVVVQSVQVTLECGLGHRTVPLLLAESKFSGNVKNWTSLMAASADMTLEVHYYNETHAVWEPLIERVEGKRPWNLRLAVKKNPVQDKSLMPGDYFILLPEPETEVDISSGDTMNITISXSCLNVFSNLAKGFSEGTASTFDYSLKDRAPFTVTNSVGVPIKVQPNHNLRVMGSLEKSDVCDVDAGQKLELEYASXEPSCQGKLSTLSRQESSLFSMTFAPHGYTEVTKVPVARPGRRLYNVWNPNASHSDSLVVQIDATEGNKVITLRSPLQIKNHFSIAFIIYKYVKNVKLLERIGVARPEEEFHVPLDSYRCQLFIQPAGILENQYXESTTYISWKEELHRSKEIRCMLQCPSTEVNFLPLIVNTIAVPDELSYICTHRKDWDPAYIIHLYPTVTLRNFLPYSLRYLLEGTAETHELAEGSAANVLHSRISGEIMELVLVKYQGKNWSGHFRICDTLPEFFLVYFSSDSTEALTVDLSIHVKRIGSQMELSIFSPYWLINKTSRVLQYRSEEIHVKHPADFRDIILFSFKKKNIFSKNKVQLKISTSSWSSGFSLDTVGNYGCVKCPANNMEYLVGVSIKMSSFNLTRIVTLTPFYTIVNKSSLELEVGEIASDGSMPTNKWNYIASSEYLPFWPEKFSGKLCVRVVGYEGSSKPFFYNQQDNGTLLSLEDLNGGILVDVDTAPHSTVISFSDYHEGSAPALIDECGQFPYDANIQIHWVSFLDGRQRVLLFTDDVALVSKALQAEEMEQANHEITFSLHSLGLSLVNNENKQEVSYIGIT