Part of scaffold_154 (Scaffold)

For more information consult the page for scaffold_154 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTX3 ENSTTRG00000014615 (Bottlenosed dolphin)

Gene Details

pentraxin 3, long

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013859, Bottlenosed dolphin)

Protein Percentage 63.52%
cDNA percentage 63.69%
Ka/Ks Ratio 0.18282 (Ka = 0.0079, Ks = 0.0434)

PTX3  (Minke Whale)

Gene Details

pentraxin 3, long

External Links

Gene match (Identifier: BACU020226, Minke Whale)

Protein Percentage 84.0%
cDNA percentage 86.19%
Ka/Ks Ratio 0.55057 (Ka = 0.1315, Ks = 0.2389)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1149 bp    Location:1096993..1102416   Strand:+
>bmy_04615
ATGCATCTCCCTGTGATTCTGTTTTGTGCTCTCTGGTCTGCAGTGTCGGCCGAGATCTCGGATGAATATGAGCTCATGTATGTGAATCTGGACAATGAAATAGACAATGGACTCCATCCCACTGAGGACCCTACGCCGTGCGACTGCAGTCGGGAGAGCTCCGAGTGGGACAAGCTCTTCATCATGCTGGAGAACTCGCAGATGCGGGAGGGCATGCTGCTGCAGGCCACCGACGACGTCCTCCGGGGTGAGCTGCAGAAGCTGCGGGCCGAGCTGGGCCGGCTGGCGGGCAGCCTGGCGAGGCCGTGCGCGCCGGTGGCCCCCGCCGAGGCCAGGCTGGCCCGGGCGCTGGACGAGCTGCTGCAGGCGAGCCGCGACGCGAGCCGCAGGCTGGCGCGCCTGGAGGAAGCCGGCGCGCTGCAGCCTCAGGAGGAGGCGGGGCGGGCCCTTGGCGCAGTGCTCGAGGAGCTGCGGCAGACGCAGGCCGACCTCCGCGCTGTGCAGGGCTGGGCGGCAGGACGCTGGCTGCCAGCAGGTTGTGAAACAGCGATTTTATTCCCCATGCGTTCCAAGAAGATTTTTGCAAGCGTGCATCCAGCAACACCAATGAAACTTGAGGCTTTCAGTGCCTGCATTTGGGTCAAAGCCACAGATGTGTTAAACAAAACTGTCCTGTTTTCCTATGGCACAAAGAGGAATCCATATGAGATCCAGCTGTACCTCAGCTATCAGTCCATCGTCCTTGTGGTGGGTGGAGAGGAAAACAGACTGGTCACCGATACTGTGATTTCCCTGGGAACGTGGACCCATCTGTGCAGCACCTGGAATTCAGAGAAAGGGCGCGTGGCCTTGTGGGTAAATGGTGACCTGGTGGCCGCCACTGTCGACATGGCCACGGGTCACGTTGTTCCCGAGGGAGGAATCCTGCAGGTTGGCCAAGAAAAGAACGGCTGCTGTGTGGGTGGTGGCTTTGATGAGACATTAGCCTTTTCTGGCAGACTCACGGGCTTCAACATCTGGGATCGTGTTCTCAGCAATGAAGACATAAGAAAGACCGGAGGAGCAGAGTCCTGTCACATCCGGGGCAATGTGGTTGGGTGGGCAGTCACAGAGATTCAGCCCCATGGAGGAGCGCAGTACATTTCTTAA

Related Sequences

bmy_04615T0 Protein

Length: 383 aa     
>bmy_04615T0
MHLPVILFCALWSAVSAEISDEYELMYVNLDNEIDNGLHPTEDPTPCDCSRESSEWDKLFIMLENSQMREGMLLQATDDVLRGELQKLRAELGRLAGSLARPCAPVAPAEARLARALDELLQASRDASRRLARLEEAGALQPQEEAGRALGAVLEELRQTQADLRAVQGWAAGRWLPAGCETAILFPMRSKKIFASVHPATPMKLEAFSACIWVKATDVLNKTVLFSYGTKRNPYEIQLYLSYQSIVLVVGGEENRLVTDTVISLGTWTHLCSTWNSEKGRVALWVNGDLVAATVDMATGHVVPEGGILQVGQEKNGCCVGGGFDETLAFSGRLTGFNIWDRVLSNEDIRKTGGAESCHIRGNVVGWAVTEIQPHGGAQYIS*