Part of scaffold_152 (Scaffold)

For more information consult the page for scaffold_152 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PSMB7 ENSTTRG00000012948 (Bottlenosed dolphin)

Gene Details

proteasome (prosome, macropain) subunit, beta type, 7

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012282, Bottlenosed dolphin)

Protein Percentage 64.86%
cDNA percentage 71.69%
Ka/Ks Ratio 0.7192 (Ka = 0.3389, Ks = 0.4712)

BT.56882 ENSBTAG00000003067 (Cow)

Gene Details

proteasome subunit beta type-7 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003990, Cow)

Protein Percentage 64.09%
cDNA percentage 70.27%
Ka/Ks Ratio 0.60871 (Ka = 0.3448, Ks = 0.5664)

PSMB7  (Minke Whale)

Gene Details

proteasome (prosome, macropain) subunit, beta type, 7

External Links

Gene match (Identifier: BACU016296, Minke Whale)

Protein Percentage 66.02%
cDNA percentage 72.2%
Ka/Ks Ratio 0.72587 (Ka = 0.3311, Ks = 0.4561)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1251 bp    Location:377407..345339   Strand:-
>bmy_04622
ATGGCGGCTGTGTCAGTGTGTGACCGACCGGTTGGAGGTTTCTCTTTCGAAAACTGCCGCAGGTGCGGCCATGTCCCGGGCCGGGTTCAGGGCGGGAGTGGTAATGCGGTGCCGGGGTCGGAGTTGGGTTGCGGTCTGAGCCGGGAAGTCCGAACGAATGGTGGAGGGCGGGGCCCCCGGCCCGCGGCACCTGTGACTCAGGGGAAAACTYTTCGTGCCAGTGCGGCGCAATGTGGTCCTGCCCTTCAACGCTTTATTCTCTCATTTGCTCTCAGAAATGCTATCTTGGAAGCCGATTTTGCAAAGAAAGGATCCAAGCTTCCAATGGCCCGGAAAACTGGGACGACTATCGCAGGGGTGGTGTATAAGGATGGCATAGTTCTTGGAGCAGATACAAGGGCAACTGAAGGAATGGTTGTTGCTGACAAGAACTCTGCGGACACAGACATGACAACCCAGCTCATTTCTTCCAACTTGGAGCTCCACTCTCTTTCCACTGGCCGCCTTCCCAGAGTTGTGACGGCCAATCGGATGCTGAAGCAGATGCTTTTCAGGTATCAAGGTTACATTGGTGCAGCCCTAGTTTTGGGGGGAGTAGATGTTACTGGACCTCACCTCTACAGCATCTATCCTCATGGATCAACTGATAAGTTGCCTTATGTCACCATGGGGGATGGGGAGATGGATGTTGAGAGAGAACCCCAGAAGTGCCAAAATTTGAGGGTTCTAAGGGACGGGAAAACTTGGAAAAGGCCTGCAAAGGGATTATTAACTTGCAGTTTGGGAAGCTATTTTGAAATGCGGGCCAGAGTAAAGGGTGCCTTTGAAAGACCTGTCAGCTCTAACTGCCTCGAGCTCCTGCAGCGGGAGAGAGAAGTGTGTGCCCTGCGCTCCGCAGTGCTGACCAGTCGCCTGTTATTAATAAGACAGATACTTCATTTCAAAAGCGTGGCTGGCGATGTGACCCTTGTGGCGTTTATGCCTGAGCCCTCTTCTCCTGGAGGTTCTGGCTCCTTAGCAGCAATGGCCGTGTTTGAAGATAAATTTAGGCCAGATATGGAGTGGGGAGGGTGGTATCTTCTGAATGACATTCCACCTGAGTCTGCTTTAATGATAGATGTACCTCCATTAAGCAACCCCCTAGACCCCAGAATCTCCAAGAACAAGCCACAGCTCATTGTCATCAGAGCATCAAGTGTCATTGGAGCTCTGAAGCTCTCTGATCTTCAGATAACAGAAGAAGATAACTAG

Related Sequences

bmy_04622T0 Protein

Length: 417 aa      View alignments
>bmy_04622T0
MAAVSVCDRPVGGFSFENCRRCGHVPGRVQGGSGNAVPGSELGCGLSREVRTNGGGRGPRPAAPVTQGKTXRASAAQCGPALQRFILSFALRNAILEADFAKKGSKLPMARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNSADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGDGEMDVEREPQKCQNLRVLRDGKTWKRPAKGLLTCSLGSYFEMRARVKGAFERPVSSNCLELLQREREVCALRSAVLTSRLLLIRQILHFKSVAGDVTLVAFMPEPSSPGGSGSLAAMAVFEDKFRPDMEWGGWYLLNDIPPESALMIDVPPLSNPLDPRISKNKPQLIVIRASSVIGALKLSDLQITEEDN*