Part of scaffold_152 (Scaffold)

For more information consult the page for scaffold_152 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NR6A1 ENSTTRG00000017391 (Bottlenosed dolphin)

Gene Details

nuclear receptor subfamily 6, group A, member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016482, Bottlenosed dolphin)

Protein Percentage 97.41%
cDNA percentage 97.65%
Ka/Ks Ratio 0.36321 (Ka = 0.0174, Ks = 0.0479)

NR6A1 ENSBTAG00000040585 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000056004, Cow)

Protein Percentage 98.05%
cDNA percentage 96.76%
Ka/Ks Ratio 0.09437 (Ka = 0.0111, Ks = 0.1174)

NR6A1  (Minke Whale)

Gene Details

nuclear receptor subfamily 6, group A, member 1

External Links

Gene match (Identifier: BACU016293, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.13%
Ka/Ks Ratio 0.08192 (Ka = 0.0024, Ks = 0.0288)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1290 bp    Location:517085..468131   Strand:-
>bmy_04626
ATGTCCTCTGTGGAACTCCATGTGTGGCCTCTGGAAATGGATTTTTATAGTGTTTCTGTTCCAGATGATCGGGCTGAACAACGAACCTGTCTCATTTGTGGGGACCGCGCCACAGGCTTGCACTATGGAATCATCTCCTGTGAGGGGTGCAAAGGGTTTTTCAAGAGGAGCATTTGCAACAAGCGGGTATATCGGTGCAGTCGTGACAAGAACTGTGTCATGTCTCGGAAGCAGAGGAACAGGTGCCAGTACTGCCGCCTGCTCAAATGCCTCCAGATGGGGATGAACCGGAAGGAGGAAGAGATCGAAAGGATTATGTCTGGGCAGGAATTTGAGGAAGAGGCCAGTCACTGGAGCAACCATGGTGACAGCGACCACAGTTCCCCTGGGAACAGGGCTTCAGAGAGCAACCAGCCCTCACCAGGCTCCACACTGTCCTCCAGTAGGTCTGTGGAACTAAATGGATTCATGGCATTCAGGGATCAATACATGGGGATGTCTGTGCCTCCACACTATCAATATATACCGCACCTTTTTAGCTATTCTGCCCACTCTCCACTTCTGCCCCCACAAGCTCGCAGCCTGGATCCCCAGTCATATAGTCTGATTCATCAGCTGGTGTCAGCCGAGGACCTGGAGCCATTGGGCACGCCCATGTTGATTGAAGATGGATATGCTGTGACTCAAGCAGAGCTATTTGCCCTGCTTTGCCGCCTGGCTGATGAGCTGCTTTTTAGGCAGATTGCCTGGATCAAGAAACTGCCTTTCTTCTGCGAGCTCTCAATCAAGGATTACACGTGCCTCCTGAGCTCTACGTGGCAGGAATTAATCCTGCTGTCCTCCCTCACTGTTTACAGCAAGCAGATCTTCGGGGAGCTGGCTGATGTCACCGCCAAGTACTCACCCTCTGATGAAGAACTACATAGATTTAGTGATGAAGGGATGGAGGTGATTGAGCGGCTCATCTACCTGTATCACAAGTTCCATCAGCTAAAAGTGAGCAATGAGGAGTATGCTTGCATGAAAGCAATTAACTTCCTAAATCAAGATATCAGGGGTCTGACCAGTGCCTCGCAGCTGGAACAATTGAACAAACGATATTGGTACATTTGCCAGGATTTCACTGAATATAAATATACACATCAGCCAAACCGTTTTCCTGACCTCATGATGTGCTTACCTGAGATTCGCTATATTGCAGGAAAGATGGTGAATGTACCCCTGGAGCAGCTGCCCCTCCTCTTTAAGGTGGTGCTGCATTCCTGCAAGACAAGTGTGGGCAAGGAGTGA

Related Sequences

bmy_04626T0 Protein

Length: 430 aa      View alignments
>bmy_04626T0
MSSVELHVWPLEMDFYSVSVPDDRAEQRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKEEEIERIMSGQEFEEEASHWSNHGDSDHSSPGNRASESNQPSPGSTLSSSRSVELNGFMAFRDQYMGMSVPPHYQYIPHLFSYSAHSPLLPPQARSLDPQSYSLIHQLVSAEDLEPLGTPMLIEDGYAVTQAELFALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGELADVTAKYSPSDEELHRFSDEGMEVIERLIYLYHKFHQLKVSNEEYACMKAINFLNQDIRGLTSASQLEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYIAGKMVNVPLEQLPLLFKVVLHSCKTSVGKE*