Sequence details bmy_04638 (Coding sequence)

Part of scaffold_152 (Scaffold)

For more information consult the page for scaffold_152 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RABEPK ENSTTRG00000017398 (Bottlenosed dolphin)

Gene Details

Rab9 effector protein with kelch motifs

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016489, Bottlenosed dolphin)

Protein Percentage 92.17%
cDNA percentage 93.14%
Ka/Ks Ratio 0.56036 (Ka = 0.0611, Ks = 0.109)

RABEPK ENSBTAG00000015098 (Cow)

Gene Details

Rab9 effector protein with kelch motifs

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020093, Cow)

Protein Percentage 86.13%
cDNA percentage 87.67%
Ka/Ks Ratio 0.34021 (Ka = 0.0925, Ks = 0.2718)

RABEPK  (Minke Whale)

Gene Details

Rab9 effector protein with kelch motifs

External Links

Gene match (Identifier: BACU016287, Minke Whale)

Protein Percentage 93.93%
cDNA percentage 94.12%
Ka/Ks Ratio 0.49056 (Ka = 0.0496, Ks = 0.1011)

Additional orthologs identified in other species via the OPTIC pipeline.

RABEPK (Human)   Rabepk (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1092 bp    Location:997854..1024802   Strand:+
Raw sequence 
>bmy_04638
ATGCAAAATGGCAAAGCATATGACACCATGAAGCAGCTGCCGGTCTTGGAGCCTGGAGACAAGCCCAGGAAAGCAACATGGTCTTACCCTCCCCCAAGTTTGTTAACCAGTATAAGCCATTGGCAGCCCCAATCTAGGAACTGGGTGAAATGTTTTCTAGGAACACACCAGTGGGATTTAGCCACCTCGGAGGGCCTCTTGCCCCGGTACGAGCATGCCAGCTTTGTTCCCTCGTGCACACCTCACAGCATCTGGGTGTTTGGAGGTGCTGACCAGTCAGGAAATCGAAATTGCCTACAAGTTCTGAATCCTGATACCTACCTTCTCTGTGGACCAGAAACGAGGACTTGGACCACGCCAAAGGTGACCAGCCCACCACCATCCCCAAGAACATTCCACACGTCATCGGCAACCATCGGAAACCAGCTGTATGTCTTTGGGGGCGGAGAGAGAGGCGCCCAGCCCGTGCAGGATGTAAAGCTGCATGTGTTTGATGCAAATACCCTGACCTGGTCACAACCAGAGACACTTGGAAAACCTCCATCCCCCCGGCATGGTCATGTGATGGTGGCAGCAGGGACAAAGCTCTTCATCCATGGAGGCTTGGCAGCGGACAATTTCTATGATGATCTCCATTGCATTGATATCAGTGACATGAAGTGGCAGAAGCTAAGTCCCACTGGGGCAGCTCCCACAGGCTGTGCTGCCCACTCAGCTGTGGCTGTAGGAAAGCACCTGTATATCTTTGGAGGGATGACTCCCACTGGAGCCCTGGGCACAATGTACCAGTATCACATAGAAAAGCAGCATTGGACCTTGCTTAAATTTGATACTTTTCTACCCCCTGGACGATTGGACCATTCCATGTGTATCATTCCATGGCCAGTGACATGTACTTCTGAGAAAGAAGATTCAAATTCTGCCACTCTAAACTGTGCTGCTGAGAAAGGGGATTCCACTGAGAAAGGAGTAACCGAAGGTGGTGACTCTCGTGAAGAAAGTCAGACTGACACACTACTCTGTTTTGTGTTTGGTGGGATGAATACGGAAGGGGAAATCTATAATGATTGTATTGTGACTGTAGTTGATTAA

Related Sequences

bmy_04638T0 Protein

Length: 364 aa      View alignments
>bmy_04638T0
MQNGKAYDTMKQLPVLEPGDKPRKATWSYPPPSLLTSISHWQPQSRNWVKCFLGTHQWDLATSEGLLPRYEHASFVPSCTPHSIWVFGGADQSGNRNCLQVLNPDTYLLCGPETRTWTTPKVTSPPPSPRTFHTSSATIGNQLYVFGGGERGAQPVQDVKLHVFDANTLTWSQPETLGKPPSPRHGHVMVAAGTKLFIHGGLAADNFYDDLHCIDISDMKWQKLSPTGAAPTGCAAHSAVAVGKHLYIFGGMTPTGALGTMYQYHIEKQHWTLLKFDTFLPPGRLDHSMCIIPWPVTCTSEKEDSNSATLNCAAEKGDSTEKGVTEGGDSREESQTDTLLCFVFGGMNTEGEIYNDCIVTVVD*