Part of scaffold_152 (Scaffold)

For more information consult the page for scaffold_152 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GAPVD1 ENSTTRG00000017400 (Bottlenosed dolphin)

Gene Details

GTPase activating protein and VPS9 domains 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016491, Bottlenosed dolphin)

Protein Percentage 83.53%
cDNA percentage 84.02%
Ka/Ks Ratio 0.40648 (Ka = 0.0362, Ks = 0.0891)

GAPVD1 ENSBTAG00000011544 (Cow)

Gene Details

GTPase-activating protein and VPS9 domain-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015341, Cow)

Protein Percentage 92.88%
cDNA percentage 89.85%
Ka/Ks Ratio 0.15952 (Ka = 0.0503, Ks = 0.3156)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3981 bp    Location:1064626..1108142   Strand:+
>bmy_04640
ATGGTGAAGCTAGATATTCATACTCTGGCCCATCACCTCAAGCAGGAACGCTTATATGTAAACTCTGAGAAACAGCTCATTCAGAGGCTCAATGCAGATGTACTTAAGACAGCTGAAAAGTTGTATCGTACAGCATGGATCGCTAAGCAACAGAGAATTAATTTGGATCGGCTTATTATAACCAGTGCTGAAGCTTCCCCTGCTGAATGTTGCCAACATGCCAAGATTTTGGAAGATACACAGTTTGTTGATGGGTATAAGCAGTTGGGATTTCAGGAGACTGCTTATGGAGAATTCTTAAGTCGATTAAGGGAAAATCCTCGTCTTATTGCCTCCTCTTTGGTTGCCGGAGAGAAACTTAATCAGGAGAACACACAAAGTGTTATTTACACAGTTTTTACCTCTCTCTATGGCAACTGCATTATGCAAGAAGATGAAAGCTACCTCCTTCAGGTGTTGAGATACTTGATTGAATTTGAACTTAAAGAAAGTGACAACCCCAGGCGACTTTTGAGGAGAGGAACTTGTGCCTTCAGCATCTTATTTAAACTTTTTTCTGAAGGACTGTTTTCTGCCAAACTTTTCCTCACAGCAACTTTACATGAGCCAATCATGCAGCTGCTTGTTGAAGATGAGGATCACCTGGAAACAGACCCAAACAAGCTAATTGAGAGGTTCTCCCCATCTCAACAGGAAAAACTCTTTGGAGAGAAAGGCTCAGATAGATTCAGGCAAAAGGTTCAAGAGATGGTGGATTCCAACGAGGCCAAACTAGTGGCTTTGGTGAACAAATTTATTGGTTATCTCAAACAGAACACATACTGCTTTCCACATAGTTTGAGATGGATTGTGTCACAGATGTACAAAACTCTCTCCTGTGTAGATAGACTGGAAGTTGGGGAGGTSAGAGCAATGTGTACTGACCTCCTGTTGGCCTGCTTCATTTGTCCTGCGGTTGTCAATCCAGAACAGTATGGAATAATTTCTGATGCTCCTATTAATGAGGTGGCAAGATTTAATCTGATGCAGGTTGGCCGCCTTTTGCAGCAATTAGCAATGACTGGCTCCGAAGAGGGAGATCCCCGGACAAAGAGCAGCCTTGGAAAATTTGACAAAATTCACGTAGTTGTTCATAAAGTTGAAGTTAAGTTTACAATTCAAGAGAAGACAGTGAGGGTCAGCAAAGAAAGGTCAACTCGGAGCAGAAGCCGCACCAATGTTCTAATGGACTTACATATGGACCATGAAGGATCAGCTCAAGAAACCATCCAGGAAGTGCAGCCAGAAGAGGTGTTGGTCATTTCCTTAGGAACAGGTCCCCAGCTTACTCCAGGGATGATGTCAGAAAATGAGGTCCTAAACATGCAGCTTTCGGATGGAGGACAAGGAGATGTCCCYGTCGATGAAAACAAACTCCACGGTAAACCTGATAAAACCTTGCGCTTTTCCCTCTGCAGTGATAATCTGGAAGGAATATCTGAAGGTCCTTCAAATCGTTCTAATTCAGTATCCTCACTAGACCTGGAAGGGGAATCTGTATCCGAACTTGGAGCAGGACCTTCTGGGAGTAATGGAGTTGAAGCTCTACAGCTGTTAGAGCATGAGCAAGCTACAACCCAGGATAATCTYGATGATAAGYTAAGGAAGTTTGAAATTCGTGACATGATGGGACTGACAGATGATAGGGATATATCAGAAACAGTGAGTGAAACGTGGAGTACAGATGTCTTGGGAAGTGATTTTGACCCTAACATTGATGAAGATCGCTTGCAAGAAATCGCAGGTGCAGCAGCAGAGAACATGTTAGGCAGTTTACTGTGCCTGCCAGGTTCAGGGTCAGTGCTTCTTGACCCCTGCACTGGTTCTACCATATCAGAGACAACAAGCGAAGCTTGGAGTGTAGAGGTATTGCCAAGTGACTCAGAGGCCCCAGATCTAAAGCAGGAGGAGCGACTACAAGAACTGGAGAGCTGTTCAGGACTGGGTAGCACATCTGATGATACGGATGTCAGGGAGGTCAGTTCCCGCCCCAGCACACCAGGCCTCAGTGTTGTGTCGGGTGCCCACCAGCTGACCTCTCCTCCTTCTCAGTCAGAGTCTCTCCTTGCCATGTTTGATCCACTGTCTTCACATGAAGGGGCTTCTGCTGTAGTAAGGCCAAAGGTTCACTATGCCCGGCCATCGCATCCACCACCAGATCCCCCAATCCTGGAAGGAGCTGCAGGAGGAAACGAGGCCAGGTTGCCAAACTTCGGTTCCCATGTCTTAACTCCAGCTGAGATGGAGGCATTTAAGCAAAGGCATTCTTACCCTGAGAGATTAGTTCGCAGCAGGAGCTCTGATATAGTGTCTTCTGTCCGGCGACCTATGAGTGACCCCAGCTGGAACCGACGTCCAGGGAATGAAGAGCGAGAACTCCCCCAAGCCGCAGCCATTGGTGCTACTTCTTTGGTGGCTGCACCTCATTCATCATCTTCCTCCCCGAGTAAGGACTCCTCAAGAGGAGAGACTGAAGAACGCAAAGATAGCGATGATGAGAAATCAGACAGGAACAGACCTTGGTGGAGAAAGCGTTTTGTTTCTGCCATGCCCAAAGCTCCTATACCATTTAGAAAGAAAGAAAAACAAGAAAAAGACAAAGATGATCTGGGGCCTGACAGATTCTCAACACTCACAGATGACCCGAGCCCTAGACTCAGTGCACAAGCTCAGGTTGCTGAGGATATTCTGGACAAATACAGGAATGCCATTAAACGAACCAGTCCCAGTGAAGGAGCACTGGCAAACTACGAAAGTGCAGGTGATAATCACGATAAAGAATGGAATAGTAACTTTCGTATCACAGTGATAAAGGTGGTCCGAATTAAAGGTAACCTTAAGTTATGGGTGATGGTGAAAGTGCACACGATTCGCCTCGTGACGAAACCCTGCAAAACATCTCAGCTGACGATCTCCCAGATTCTGCGAGCCAAGCCGCCCACCCTCAGGATTCAGCTTTCTCTTACAGACAATGAAATTGTCTGCTTCCTAAAAGTTCAAATAGCTGAAGCAATTAATTTACAAGATAAAAACTTAATGGCTCAACTTCAAGAAACAATGCGTTGTGTGTGCCGCTTTGATAACAGGACTTGTAGGAAACTACTGGCTTCTATCGCCGAGGACTATAGGAAAAGGGCCCCCTATATTGCTTACCTCACTCGTTGTCGACAAGGACTGCAGACCACGCAGGCTCACCTGGAAAGGCTACTACAAAGGGTTTTGCGGGACAAAGAGGTGGCCAATCGATACTTCACCACTGTCTGTGTGAGGTTGCTGCTTGAGAGCAAAGAAAAGAAGATCAGGGAATTCATTCAAGACTTTCAGAAGCTMACAGCAGCTGATGATAAAACTGCTCAGGTGGAAGATTTTCTGCAGTTCCTTTATGGCGCCATGGCCCAGGATGTCATATGGCAGAATGCGAGTGAGGAGCAGCTTCAGGATGCTCAGCTCGCCATTGAGCGAAGTGTGATGAATCGGATCTTCAAACTTGCCTTCTACCCTAATCAGGACGGGGACATACTCCGTGACCAAGTTCTTCATGAACATATTCAGAGATTGTCTAAAGTAGTGACTGCAAATCACAGAGCTCTTCAGATACCAGAGGTTTATCTTCGGGAGGCACCGTGGCCATCTGCACAGTCAGAAATCAGGACAATAAGTGCTTACAAGACACCCCGGGACAAAGTGCAGTGCATCCTGAGAATGTGCTCCACGATCATGAACCTGCTGAGCCTGGCCAACGAGGACTCCGTCCCAGGAGCCGATGACTTCGTCCCTGTTTTGGTTTTTGTGTTGATAAAGGCAAATCCACCCTGTTTGCTGTCCACTGTTCAGTACATCAGTAGCTTTTATGCCAGCTGTCTGTCTGGAGAGGAGTCTTATTGGTGGATGCAGTTCACAGCAGCAGTTGAATTCATTAAGACTATCGATGACCGAAAGTAA

Related Sequences

bmy_04640T0 Protein

Length: 1327 aa      View alignments
>bmy_04640T0
MVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWIAKQQRINLDRLIITSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLSRLRENPRLIASSLVAGEKLNQENTQSVIYTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSILFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPSQQEKLFGEKGSDRFRQKVQEMVDSNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVGEVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGDPRTKSSLGKFDKIHVVVHKVEVKFTIQEKTVRVSKERSTRSRSRTNVLMDLHMDHEGSAQETIQEVQPEEVLVISLGTGPQLTPGMMSENEVLNMQLSDGGQGDVPVDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGAHQLTSPPSQSESLLAMFDPLSSHEGASAVVRPKVHYARPSHPPPDPPILEGAAGGNEARLPNFGSHVLTPAEMEAFKQRHSYPERLVRSRSSDIVSSVRRPMSDPSWNRRPGNEERELPQAAAIGATSLVAAPHSSSSSPSKDSSRGETEERKDSDDEKSDRNRPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDLGPDRFSTLTDDPSPRLSAQAQVAEDILDKYRNAIKRTSPSEGALANYESAGDNHDKEWNSNFRITVIKVVRIKGNLKLWVMVKVHTIRLVTKPCKTSQLTISQILRAKPPTLRIQLSLTDNEIVCFLKVQIAEAINLQDKNLMAQLQETMRCVCRFDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYASCLSGEESYWWMQFTAAVEFIKTIDDRK*