Part of scaffold_155 (Scaffold)

For more information consult the page for scaffold_155 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCER1 ENSTTRG00000001333 (Bottlenosed dolphin)

Gene Details

coiled-coil glutamate-rich protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001253, Bottlenosed dolphin)

Protein Percentage 46.62%
cDNA percentage 48.4%
Ka/Ks Ratio 0.42259 (Ka = 0.0444, Ks = 0.1052)

CCER1 ENSBTAG00000007035 (Cow)

Gene Details

Uncharacterized protein C12orf12 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000051759, Cow)

Protein Percentage 79.58%
cDNA percentage 86.15%
Ka/Ks Ratio 0.30223 (Ka = 0.1118, Ks = 0.37)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 855 bp    Location:324308..323454   Strand:-
>bmy_04648
ATGCAAGTGATCCGGGTGTACGGCCTGCACCCATTCTGCCTTTGCTGCTGCTCCTGCTGGCGCGGGCCCTGGAACCCCGGCTGGGCGAGGCCCCCGGGCAGGAAGAAGCACTGGGGCCGCCGGGGCCGCGGCCTGCGCCGCGACCCTCGCCGCTCCTTCCAGAGGAGCCCTTCAGAGGATCTGAGCACGCTGCTGCGGCCGGTCAACCTGTCCAGGTGGCGGGTACCCGGCCTGCGGGCGCCGCGGAACACCACCCAGTTCATCATGAACCAGATCTACGAGGATATGCGGCAGCAGGAGGAGCTGGAGCGCCAGCAGGAGGCGCTGCGGGCGCAGCAGGCCCAGGCGGGCGGCACCGCATCCCCGGGCGGCTCCTTCGGAAACGATGCGCCCCCCAGCGGTGGCGAGGAAGACACGGAGCTGCGGGAAACTTTGTATAGCTTTGGGCAGAATCCTTCTGTAGCCTTCAGTCCTGACCCGGATGGGGAAAACCAGTCTCCAAGCCCACAGCTGGTAGAGGAAGAGGAGAAAAATGATGATGAGGAGGAGAAGGAGTGTGACGAGGAGGAGTGTGATGGCAAGGGGTTGGAGAGCGAGGAGGAGGATGCAGAGGCAGAGGCCAAGGGTGAAGAGGAGGTCGAAGAGTCTGACTCTGCGGAGGAGGGGGAGGAGGAGGAAGAGGAGGGGCTGGAGGAGGAAGAGAATCGTTTGCCTYTGGAAATGCCCTTATCAATCCTAGCGGGGGCGGAAGAAGAGAGAGAGAACCTTATAAACTGTACTTATTTAAACCCAAAACAGATAATTCCCAAAGTGCCACAGGAAGCTCTCCTCATGGTACARGACATTAACTGTTAG

Related Sequences

bmy_04648T0 Protein

Length: 285 aa      View alignments
>bmy_04648T0
MQVIRVYGLHPFCLCCCSCWRGPWNPGWARPPGRKKHWGRRGRGLRRDPRRSFQRSPSEDLSTLLRPVNLSRWRVPGLRAPRNTTQFIMNQIYEDMRQQEELERQQEALRAQQAQAGGTASPGGSFGNDAPPSGGEEDTELRETLYSFGQNPSVAFSPDPDGENQSPSPQLVEEEEKNDDEEEKECDEEECDGKGLESEEEDAEAEAKGEEEVEESDSAEEGEEEEEEGLEEEENRLPLEMPLSILAGAEEERENLINCTYLNPKQIIPKVPQEALLMVQDINC*