Part of scaffold_155 (Scaffold)

For more information consult the page for scaffold_155 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DCN ENSTTRG00000001340 (Bottlenosed dolphin)

Gene Details

decorin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001260, Bottlenosed dolphin)

Protein Percentage 97.89%
cDNA percentage 97.99%
Ka/Ks Ratio 0.21951 (Ka = 0.0102, Ks = 0.0464)

DCN ENSBTAG00000003505 (Cow)

Gene Details

Decorin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004562, Cow)

Protein Percentage 95.2%
cDNA percentage 94.59%
Ka/Ks Ratio 0.1363 (Ka = 0.0232, Ks = 0.1705)

DCN  (Minke Whale)

Gene Details

decorin

External Links

Gene match (Identifier: BACU000983, Minke Whale)

Protein Percentage 99.15%
cDNA percentage 99.06%
Ka/Ks Ratio 0.13874 (Ka = 0.0038, Ks = 0.0273)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1068 bp    Location:531333..500547   Strand:-
>bmy_04652
ATGCTGGAAGATGAGGCTTCTGGGATAGGCCCGGACGACCGCTTTCACGAAGTTCCTGAATTCGAGCCTCAGGCACCAGTGTGCCCCTTCCGCTGTCAATGCCATCTTCGAGTTGTCCAGTGTTCTGATTTGGGTCTGGACAAAGTGCCAAAAGATCTTCCCCCTGACACTGCACTGCTGGACCTGCAAAACAACAAAATAACTGAAATCAAAGATGGAGACTTTAAGAACCTGAAGAACCTTCATACGTTGATTCTTATCAACAACAAAATTAGCAAAATCAGCCCTGGGGCATTTGCACCTTTGGTGAAATTGGAACGACTTTATCTGTCCAAGAATCAACTGAAGGAATTGCCAGAGAAAATGCCCAAAACTCTTCAGGAGCTGCGTGTCCATGAGAACGAGATCACCAAAGTGCGAAAGTCTGTGCTCAATGGATTGAACCAGTTGATTGTCGTAGACACTACTCTGACTTGCAATATCCTCAAATTGTCCTCTAAAAGCTTTGCACTTATTGCATTTGTAGAACTTGGCACCAACCCTCTGAAGAGCTCAGGCATTGAAAACGGAGCCTTCCAGGGAATGAAGAAGCTCTCCTACATCCGCATTGCTGACACCAATATAACCACCATCCCTCAAGGTCTTCCTCCTTCTCTTACTGAATTACATCTTGATGGCAACAAAATCACCAAAGTTGATGCAGCTAGCCTGAAAGGATTGAATAATTTGGCTAAGTTGGGACTGAGTTTCAACAGCATCTCTGGTGTCGACAATGACTCTCTGGCCAACACTCCTCATTTGAGGGAACTTCATTTGAACAACAACAAGCTTATCAAAGTGCCTGGTGGGCTGGCGGATCATAAGTACATTCAGGTTGTCTACCTTCACAACAACAATATCTCTGCAATCGGCCCTAACGACTTCTGCCCACCTGGATACAACACCAAAAAGGCTTCTTATTCTGGGGTGAGCCTTTTCAGCAACCCAGTCCAGTACTGGGAGATCCAGCCATCCACCTTCCGATGTGTCTATGTGCGCTCTGCCATTCAGCTCGGAAACTACAAGTAG

Related Sequences

bmy_04652T0 Protein

Length: 356 aa      View alignments
>bmy_04652T0
MLEDEASGIGPDDRFHEVPEFEPQAPVCPFRCQCHLRVVQCSDLGLDKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVLNGLNQLIVVDTTLTCNILKLSSKSFALIAFVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISGVDNDSLANTPHLRELHLNNNKLIKVPGGLADHKYIQVVYLHNNNISAIGPNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRSAIQLGNYK*