Part of scaffold_156 (Scaffold)

For more information consult the page for scaffold_156 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ITGB7 ENSTTRG00000002777 (Bottlenosed dolphin)

Gene Details

integrin, beta 7

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002605, Bottlenosed dolphin)

Protein Percentage 91.45%
cDNA percentage 91.97%
Ka/Ks Ratio 0.26883 (Ka = 0.0277, Ks = 0.1032)

ITGB7 ENSBTAG00000018993 (Cow)

Gene Details

integrin beta-7 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025279, Cow)

Protein Percentage 91.61%
cDNA percentage 90.94%
Ka/Ks Ratio 0.1644 (Ka = 0.0447, Ks = 0.2717)

ITGB7  (Minke Whale)

Gene Details

integrin, beta 7

External Links

Gene match (Identifier: BACU018274, Minke Whale)

Protein Percentage 96.48%
cDNA percentage 97.09%
Ka/Ks Ratio 0.40352 (Ka = 0.0199, Ks = 0.0494)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1821 bp    Location:496273..487076   Strand:-
>bmy_04672
ATGGTGGCTTTGTCAATGGTCCTTGTTTTCCTGCTGGCCCTGAGCAGAGGTGAAAGTGAACTGGACACCAAGATCTCATCCCCACAGGAGACCACAGAATGGGGGGATCCTGGGCTGTCCCTACCAGGGTCCTGCCAGCCAGCTCCCTCCTGTCAAAAGTGCATCCTCTCACACCCGAGCTGTGCATGGTGCAAGCAACTGGGTCCCGACGCGCCTCCACTTGCGGCGCAGAACTTCACGGCGTCCGGGGAGGCGGAGGTGCGCCGCTGCGCCCTGCGAGAGGAGCTGCTGGCCCGGGGCTGTCCCCCGGGGGAGCTGGAGGAGCCCCGCGGCCGGCAGGAGGTGCTGCAGGACAAGCCGCTCAGCCAGGGCACCCGCGGCGAGGGGGCCACCCAGCTGGCACCGCAGCGGGTCCGGGTCACGCTGCGGCCGGGAGAGCCCCAGCAGCTCCGGGTCCGCTTCCTTCGAGCCGAGGGATACCCTGTGGACCTGTACTACCTTATGGACCTGAGCTACTCCATGAAGGACGACCTGGAGCGCGTGCGCCAGCTTGGGCACGCGCTGCTGGTGAGGTTGCAGGAAGTCACCCACTCCGTGCGCATTGGCTTTGGTTCCTTCGTGGACAAAATGGTGCTGCCCTTCGTGAGCACAGTGCCCTCCAAGCTTCGCCACCCCTGCCCCACCCGGCTGGAGCGCTGCCAGCCGCCCTTCAGCTTTCACCATGTGCTATCCCTCACCGGGGATGCTAAGGCCTTCGAACGGGAGGTGGGACGCCAGAGCGTGTCCGGCAACCTGGACTCGCCTGAAGGTGGCTTTGATGCCATTCTGCAGGCTGCCCTCTGCCAGGAGCAGATTGGCTGGAGAAATGTGTCCCGGCTACTGGTGTTCACTTCAGATGACACATTCCACACAGCTGGGGATGGCAAGTTGGGTGGCATTTTCATGCCCAGCGACGGGCACTGCCACTTGGACAGCAATGGCCTCTACAGTCGCAGCCCAGAGTTTGACTACCCCTCCGTGGGTCAGGTAGCCCAGGCCCTCTCTGCGGCAAACATCCAGCCCATCTTTGCTGTCACTGGTGCCACACTGCCTGTCTACCAGGAGCTGAGTAAGCTGATTCCCAAGTCCGCAGTGGGGGAGCTGAGTGAGGACTCCAGCAATGTGGTCCAGCTCATCATGGATGCTTATAATAGCCTATCATCCACTGTGACCCTTGAACATGAACGCTCTCTACTCCCTCCTGGGGTCCGCATCTCTTACGATTCTCAGTGTGGGGGTCCTGAGAAGAGACAGGATGAGGCTGGTGACAGGGGCCAGTGCAACCACGTCCGAATCAACCAGACAGTGAATTTTCTGGTTACTCTCCAAGCTACCCACTGCCTCCCAGAACCCCATCTGCTGAGGTTCCGAGCCCGTGGCTTCTCAGAGGAGCTGACTGTGGAGTTGCACACACTGTGTGACTGTAACTGCAGTGACACCCAGCTCCAGGCTCCTCACTGCAGTGACGGCCAGGGGCACCTACAATGCGGGGTGTGCAGCTGTGTCCCTGGCCACCTGGGTCGGCTCTGTGAGTGCTCTGAGGCTGAGCTGTCCTCCCTGGATCTGGAATCTGGGTGTCGAGCCCCCAATGGCACAGGGCCCCTGTGCAGTGGGAGGGGACGGTGCCAGTGTGGACGCTGCACCTGCAGCGGACAGAGCTCTGGACGTCTGTGTGAATGTGATGATGCCAGCTGTGAGCGACATGAGGGAATCCTCTGTGGAGGTACCTGGAGACTTTGGGGAGAAGGACGGGGTCAGAGTGGCTTCYCCAAGGGTGTWTAG

Related Sequences

bmy_04672T0 Protein

Length: 607 aa      View alignments
>bmy_04672T0
MVALSMVLVFLLALSRGESELDTKISSPQETTEWGDPGLSLPGSCQPAPSCQKCILSHPSCAWCKQLGPDAPPLAAQNFTASGEAEVRRCALREELLARGCPPGELEEPRGRQEVLQDKPLSQGTRGEGATQLAPQRVRVTLRPGEPQQLRVRFLRAEGYPVDLYYLMDLSYSMKDDLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKMVLPFVSTVPSKLRHPCPTRLERCQPPFSFHHVLSLTGDAKAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWRNVSRLLVFTSDDTFHTAGDGKLGGIFMPSDGHCHLDSNGLYSRSPEFDYPSVGQVAQALSAANIQPIFAVTGATLPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNSLSSTVTLEHERSLLPPGVRISYDSQCGGPEKRQDEAGDRGQCNHVRINQTVNFLVTLQATHCLPEPHLLRFRARGFSEELTVELHTLCDCNCSDTQLQAPHCSDGQGHLQCGVCSCVPGHLGRLCECSEAELSSLDLESGCRAPNGTGPLCSGRGRCQCGRCTCSGQSSGRLCECDDASCERHEGILCGGTWRLWGEGRGQSGFXKGV*