Part of scaffold_156 (Scaffold)

For more information consult the page for scaffold_156 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SP1 ENSTTRG00000009591 (Bottlenosed dolphin)

Gene Details

Sp1 transcription factor

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009089, Bottlenosed dolphin)

Protein Percentage 99.11%
cDNA percentage 99.17%
Ka/Ks Ratio 0.43585 (Ka = 0.0061, Ks = 0.0141)

SP1 ENSBTAG00000003021 (Cow)

Gene Details

transcription factor Sp1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003929, Cow)

Protein Percentage 98.04%
cDNA percentage 96.92%
Ka/Ks Ratio 0.16033 (Ka = 0.013, Ks = 0.0812)

SP1  (Minke Whale)

Gene Details

Sp1 transcription factor

External Links

Gene match (Identifier: BACU008076, Minke Whale)

Protein Percentage 98.76%
cDNA percentage 98.7%
Ka/Ks Ratio 0.33684 (Ka = 0.0087, Ks = 0.0259)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1713 bp    Location:645242..648293   Strand:+
>bmy_04681
ATGAGCGTTATTTTTAAATTCTTTTTAGACCAAGATCACTCCATGGATGAAATGACAGCTGTGGTGAAGATTGAAAAAGGAGTTGGTGGCAATAATGGGGGCAGTGGTAATGGTGGTGGTACCTTTTCTCAGGCTCGAAGCAGCAGCACAGGCAGTAGCAGCAGCAGTGGAGGAGGAGGAGGGCAGGAATCCCAGCCATCCCCTTTGGCCCTGCTGGCAGCAACTTGCAGCAGAATTGAGTCACCCAATGAAAACAGCAACAACTCCCAGGGCCCAAGCCAGTCAGGGGGCACAGGTGAGCTTGACCTCACAGCCACACAACTTTCCCAGGGTGCCAATGGCTGGCAGATCATCTCTTCCTCCTCTGGGGCTACCCCTACCTCGAAGGAACAGAGTGGCAGCAGTACCAATGGCAACAATGGCAGTGAGTCTTCCAAGAATCGCACGGTCTCTGGTGGGCAGTATGTTGTGGCTGCCACCTCCAACCTACAGAACCAGCAAGTCCTGACAGGACTGCCTGGAGTGATGCCTAATATTCAGTATCAAGTAATCCCACAGTTCCAGACCGTTGATGGGCAACAGCTGCAATTTGCTGCCACTGGGGCTCAAGTGCAGCAGGATGGTTCAGGTCAGATACAGATCATACCAGGTGCAAACCAACAGATCATCACAAATCGAGGAAGTGGAGGCAACATCATTGCTGCTATGCCAAACCTACTCCAGCAGGCTGTCCCCCTCCAAGGCCTGGCTAATAATGTACTCTCAGGACAGACTCAGTATGTGACCAATGTACCAGTGGCCCTGAATGGGAATATTACCTTGCTACCTGTCAACAGCGTTTCTGCAGCTACCTTGACTCCTAGCTCTCAGGCAGTCACGATCAGCAGCTCTGGGTCCCAGGAGAGTGGCTCACAGCCTGTCACCTCAGGGACTGCCATCAGTTCTGCCAGTTTGGTATCATCACAAGCCAGTTCCAGCTCCTTTTTCACCAATGCCAATAGCTACTCAACAACTACTACCACCAGCAACATGGGAATTATGAACTTTACCACCAGCGGATCAGCAGGGACCAACTCTCAAAGCCAGACACCGCAGAGGGTCAGTGGGCTGCAGGGATCTGATGCTCTGAACATCCAGCAGAACCAGACATCTGGAGGCTCACTGCAAGCAAGTCAACAAAAAGAGGGAGAGCAAAACCAGCAGACGCAGCAACAACAACAAATTCTCATCCAGCCTCAACTAGTTCAAGGGGGACAGGCCCTCCAGGCCCTCCAAGCAGCCCCACTGTCAGGGCAGACCTTTACAACTCAAGCTATCTCCCAGGAAACCCTCCAGAACCTTCAGCTTCAGGCTGTTCCAAACTCTGGCCCTATCATCATCCGGACACCAACAGTGGGGCCCAATGGACAGGTCAGTTGGCAGACTCTTCAGCTGCAGAACCTCCAAGTTCAGAACCCACAGGCCCAGACAATCACCTTGGCCCCAATGCAGGGTGTTTCCTTGGGGCAGACCAGCAGCAGCAGTACCACCCTTACACCTATTGCCTCAGCTGCCTCCATCCCTGCCGGCACAGTCACTGTGAATGCTGCTCAACTCTCCTCCATGCCTGGCCTCCAGACCATTAACCTCAGTGCATTGGGTGCTTCAGGAATCCAGGTGCACCAGCTTCCAAGCCTGCCCTTGGCTATAGCAAATGCCTCAGGTAAGGCTTGA

Related Sequences

bmy_04681T0 Protein

Length: 571 aa      View alignments
>bmy_04681T0
MSVIFKFFLDQDHSMDEMTAVVKIEKGVGGNNGGSGNGGGTFSQARSSSTGSSSSSGGGGGQESQPSPLALLAATCSRIESPNENSNNSQGPSQSGGTGELDLTATQLSQGANGWQIISSSSGATPTSKEQSGSSTNGNNGSESSKNRTVSGGQYVVAATSNLQNQQVLTGLPGVMPNIQYQVIPQFQTVDGQQLQFAATGAQVQQDGSGQIQIIPGANQQIITNRGSGGNIIAAMPNLLQQAVPLQGLANNVLSGQTQYVTNVPVALNGNITLLPVNSVSAATLTPSSQAVTISSSGSQESGSQPVTSGTAISSASLVSSQASSSSFFTNANSYSTTTTTSNMGIMNFTTSGSAGTNSQSQTPQRVSGLQGSDALNIQQNQTSGGSLQASQQKEGEQNQQTQQQQQILIQPQLVQGGQALQALQAAPLSGQTFTTQAISQETLQNLQLQAVPNSGPIIIRTPTVGPNGQVSWQTLQLQNLQVQNPQAQTITLAPMQGVSLGQTSSSSTTLTPIASAASIPAGTVTVNAAQLSSMPGLQTINLSALGASGIQVHQLPSLPLAIANASGKA*