Sequence detailsbmy_04681 (Coding sequence)

Part of scaffold_156 (SequenceType object (1))

For more information consult the page for scaffold_156 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SP1ENSTTRG00000009591 (Bottlenosed dolphin)

Gene Details

Sp1 transcription factor

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009089, Bottlenosed dolphin)

Protein Percentage 99.11%
cDNA percentage 99.17%
Ka/Ks Ratio 0.43585 (Ka = 0.0061, Ks = 0.0141)

SP1ENSBTAG00000003021 (Cow)

Gene Details

transcription factor Sp1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000003929, Cow)

Protein Percentage 98.04%
cDNA percentage 96.92%
Ka/Ks Ratio 0.16033 (Ka = 0.013, Ks = 0.0812)

SP1 (Minke Whale)

Gene Details

Sp1 transcription factor

External Links

Gene match (Identifier: BACU008076, Minke Whale)

Protein Percentage 98.76%
cDNA percentage 98.7%
Ka/Ks Ratio 0.33684 (Ka = 0.0087, Ks = 0.0259)

Additional orthologs identified in other species via the OPTIC pipeline.

SP1 (Human)   Sp1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1713 bp    Location:645242..648293   Strand:+
Raw sequence 
>bmy_04681
ATGAGCGTTATTTTTAAATTCTTTTTAGACCAAGATCACTCCATGGATGAAATGACAGCTGTGGTGAAGATTGAAAAAGGAGTTGGTGGCAATAATGGGGGCAGTGGTAATGGTGGTGGTACCTTTTCTCAGGCTCGAAGCAGCAGCACAGGCAGTAGCAGCAGCAGTGGAGGAGGAGGAGGGCAGGAATCCCAGCCATCCCCTTTGGCCCTGCTGGCAGCAACTTGCAGCAGAATTGAGTCACCCAATGAAAACAGCAACAACTCCCAGGGCCCAAGCCAGTCAGGGGGCACAGGTGAGCTTGACCTCACAGCCACACAACTTTCCCAGGGTGCCAATGGCTGGCAGATCATCTCTTCCTCCTCTGGGGCTACCCCTACCTCGAAGGAACAGAGTGGCAGCAGTACCAATGGCAACAATGGCAGTGAGTCTTCCAAGAATCGCACGGTCTCTGGTGGGCAGTATGTTGTGGCTGCCACCTCCAACCTACAGAACCAGCAAGTCCTGACAGGACTGCCTGGAGTGATGCCTAATATTCAGTATCAAGTAATCCCACAGTTCCAGACCGTTGATGGGCAACAGCTGCAATTTGCTGCCACTGGGGCTCAAGTGCAGCAGGATGGTTCAGGTCAGATACAGATCATACCAGGTGCAAACCAACAGATCATCACAAATCGAGGAAGTGGAGGCAACATCATTGCTGCTATGCCAAACCTACTCCAGCAGGCTGTCCCCCTCCAAGGCCTGGCTAATAATGTACTCTCAGGACAGACTCAGTATGTGACCAATGTACCAGTGGCCCTGAATGGGAATATTACCTTGCTACCTGTCAACAGCGTTTCTGCAGCTACCTTGACTCCTAGCTCTCAGGCAGTCACGATCAGCAGCTCTGGGTCCCAGGAGAGTGGCTCACAGCCTGTCACCTCAGGGACTGCCATCAGTTCTGCCAGTTTGGTATCATCACAAGCCAGTTCCAGCTCCTTTTTCACCAATGCCAATAGCTACTCAACAACTACTACCACCAGCAACATGGGAATTATGAACTTTACCACCAGCGGATCAGCAGGGACCAACTCTCAAAGCCAGACACCGCAGAGGGTCAGTGGGCTGCAGGGATCTGATGCTCTGAACATCCAGCAGAACCAGACATCTGGAGGCTCACTGCAAGCAAGTCAACAAAAAGAGGGAGAGCAAAACCAGCAGACGCAGCAACAACAACAAATTCTCATCCAGCCTCAACTAGTTCAAGGGGGACAGGCCCTCCAGGCCCTCCAAGCAGCCCCACTGTCAGGGCAGACCTTTACAACTCAAGCTATCTCCCAGGAAACCCTCCAGAACCTTCAGCTTCAGGCTGTTCCAAACTCTGGCCCTATCATCATCCGGACACCAACAGTGGGGCCCAATGGACAGGTCAGTTGGCAGACTCTTCAGCTGCAGAACCTCCAAGTTCAGAACCCACAGGCCCAGACAATCACCTTGGCCCCAATGCAGGGTGTTTCCTTGGGGCAGACCAGCAGCAGCAGTACCACCCTTACACCTATTGCCTCAGCTGCCTCCATCCCTGCCGGCACAGTCACTGTGAATGCTGCTCAACTCTCCTCCATGCCTGGCCTCCAGACCATTAACCTCAGTGCATTGGGTGCTTCAGGAATCCAGGTGCACCAGCTTCCAAGCCTGCCCTTGGCTATAGCAAATGCCTCAGGTAAGGCTTGA

Related Sequences

bmy_04681T0 SequenceType object (3)

Length: 571 aa      View alignments
>bmy_04681T0
MSVIFKFFLDQDHSMDEMTAVVKIEKGVGGNNGGSGNGGGTFSQARSSSTGSSSSSGGGGGQESQPSPLALLAATCSRIESPNENSNNSQGPSQSGGTGELDLTATQLSQGANGWQIISSSSGATPTSKEQSGSSTNGNNGSESSKNRTVSGGQYVVAATSNLQNQQVLTGLPGVMPNIQYQVIPQFQTVDGQQLQFAATGAQVQQDGSGQIQIIPGANQQIITNRGSGGNIIAAMPNLLQQAVPLQGLANNVLSGQTQYVTNVPVALNGNITLLPVNSVSAATLTPSSQAVTISSSGSQESGSQPVTSGTAISSASLVSSQASSSSFFTNANSYSTTTTTSNMGIMNFTTSGSAGTNSQSQTPQRVSGLQGSDALNIQQNQTSGGSLQASQQKEGEQNQQTQQQQQILIQPQLVQGGQALQALQAAPLSGQTFTTQAISQETLQNLQLQAVPNSGPIIIRTPTVGPNGQVSWQTLQLQNLQVQNPQAQTITLAPMQGVSLGQTSSSSTTLTPIASAASIPAGTVTVNAAQLSSMPGLQTINLSALGASGIQVHQLPSLPLAIANASGKA*